library(rvest)
## Loading required package: xml2
#Load the data from website
site <- "http://wiki.socr.umich.edu/index.php/SOCR_Data_AD_BiomedBigMetadata"
wiki_url <- read_html(site)
html_nodes(wiki_url, "#content")
## {xml_nodeset (1)}
## [1] <div id="content" class="mw-body-primary" role="main">\n\t<a id="top ...
ad_data <- html_table(html_nodes(wiki_url,"table")[[1]])
head(ad_data)
## SID MMSCORE FAQTOTAL GDTOTAL adascog sobcdr DXCURREN DX_Conversion
## 1 2 28 0 1 10.67 0.0 1 0
## 2 3 20 10 1 22 4.5 3 0
## 3 5 29 0 0 8.67 0.0 1 0
## 4 6 25 0 0 18.67 0.5 2 0
## 5 8 28 0 0 5 0.0 1 0
## 6 10 24 11 2 12.33 5.0 3 0
## DXCONTYP DX_Confidence Gender Married Education Age Weight_Kg VSBPSYS
## 1 -4 4 1 2 16 79 89.00000 110
## 2 -4 3 1 1 18 81 74.00000 148
## 3 -4 4 1 1 16 74 88.00000 150
## 4 -4 3 2 1 13 80 69.39972 123
## 5 -4 3 2 2 18 84 60.00000 124
## 6 -4 3 2 1 12 74 68.00000 140
## VSBPDIA VSPULSE VSRESP VSTEMP SymptomeSeverety SymptomeChronicity
## 1 80 60 20 35.7 1 2
## 2 70 60 18 36.6 2 2
## 3 80 52 18 35.9 3 3
## 4 76 55 20 36.1 1 2
## 5 74 80 20 35.6 2 3
## 6 80 72 20 35.6 2 3
## BC.USEA BCVOMIT BCDIARRH BCCONSTP BCABDOMN BCSWEATN BCDIZZY BCENERGY
## 1 1 1 1 1 1 1 1 1
## 2 1 1 1 1 1 1 1 1
## 3 1 1 1 2 1 1 1 1
## 4 1 1 1 1 1 1 1 1
## 5 1 1 1 2 1 1 1 1
## 6 1 1 1 1 1 1 1 2
## BCDROWSY BCVISION BCHDACHE BCDRYMTH BCBREATH BCCOUGH BCPALPIT BCCHEST
## 1 1 1 1 1 1 2 1 1
## 2 1 1 1 1 1 1 2 1
## 3 1 2 1 1 1 1 1 1
## 4 1 1 1 1 1 1 1 1
## 5 1 1 1 1 1 1 1 1
## 6 1 1 1 1 1 1 1 2
## BCURNDIS BCURNFRQ BCANKLE BCMUSCLE BCRASH BCINSOMN BCDPMOOD BCCRYING
## 1 1 2 1 2 2 1 1 1
## 2 1 1 1 2 1 2 1 1
## 3 1 2 2 2 1 1 1 1
## 4 1 1 1 1 1 1 1 1
## 5 1 2 1 1 1 1 1 1
## 6 1 1 1 1 1 1 2 1
## BCELMOOD BCWANDER BCFALL BCOTHER CTWHITE CTRED PROTEIN GLUCOSE
## 1 1 1 1 1 . . . .
## 2 1 1 1 1 0 2 64 58
## 3 1 1 1 1 2 1 43 59
## 4 1 1 1 1 . . . .
## 5 1 1 1 1 3 4 41 57
## 6 1 1 1 1 0 66 35 52
## ApoEGeneAllele1 ApoEGeneAllele2 CDMEMORY CDORIENT CDJUDGE CDCOMMUN
## 1 3 3 0 0.0 0 0
## 2 3 4 0 1.0 1 1
## 3 3 3 0 0.0 0 0
## 4 3 3 0 0.5 0 0
## 5 2 3 0 0.0 0 0
## 6 3 4 0 1.0 1 1
## CDHOME CDCARE CDGLOBAL
## 1 0 0.0 0
## 2 1 0.5 0
## 3 0 0.0 0
## 4 0 0.0 0
## 5 0 0.0 0
## 6 1 1.0 0
# 10.2 Step 2: Exploring and preparing the data
# To make sure that the data is ready for further modeling, we first should delete the subject ID variable as it is not needed in the dimension reduction procedures.
ad_data <- ad_data[ ,-1]
ad_data[ad_data == "."] <- 0
ad_data$SymptomeChronicity <- as.numeric(ad_data$SymptomeChronicity)
ad_data$FAQTOTAL <- as.numeric(ad_data$FAQTOTAL)
ad_data$DX_Confidence <- as.numeric(ad_data$DX_Confidence)
ad_data$SymptomeSeverety <- as.numeric(ad_data$SymptomeSeverety)
ad_data$CTWHITE <- as.numeric(ad_data$CTWHITE)
ad_data$CTRED <- as.numeric(ad_data$CTRED)
ad_data$PROTEIN <- as.numeric(ad_data$PROTEIN)
ad_data$GLUCOSE <- as.numeric(ad_data$GLUCOSE)
ad_data$DX_Conversion <- as.numeric(ad_data$DX_Conversion)
ad_data$adascog <- as.numeric(ad_data$adascog)
ad_data$FAQTOTAL <- as.numeric(ad_data$FAQTOTAL)
summary(ad_data)
## MMSCORE FAQTOTAL GDTOTAL adascog
## Min. :18.00 Min. : 0.000 Min. :0.000 Min. : 0.000
## 1st Qu.:25.00 1st Qu.: 0.000 1st Qu.:0.000 1st Qu.: 6.918
## Median :27.00 Median : 2.000 Median :1.000 Median :10.670
## Mean :26.81 Mean : 4.978 Mean :1.367 Mean :11.661
## 3rd Qu.:29.00 3rd Qu.: 8.000 3rd Qu.:2.000 3rd Qu.:15.000
## Max. :30.00 Max. :30.000 Max. :6.000 Max. :42.670
## sobcdr DXCURREN DX_Conversion DXCONTYP
## Min. :0.000 Min. :1.000 Min. :0.0000 Min. :-4.000
## 1st Qu.:0.000 1st Qu.:1.000 1st Qu.:0.0000 1st Qu.:-4.000
## Median :1.500 Median :2.000 Median :0.0000 Median :-4.000
## Mean :1.785 Mean :1.958 Mean :0.0121 Mean :-3.962
## 3rd Qu.:2.625 3rd Qu.:2.000 3rd Qu.:0.0000 3rd Qu.:-4.000
## Max. :9.000 Max. :3.000 Max. :2.0000 Max. : 3.000
## DX_Confidence Gender Married Education
## Min. :0.000 Min. :1.000 Min. :1.000 Min. : 6.00
## 1st Qu.:3.000 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:14.00
## Median :4.000 Median :1.000 Median :1.000 Median :16.00
## Mean :3.608 Mean :1.407 Mean :1.083 Mean :15.64
## 3rd Qu.:4.000 3rd Qu.:2.000 3rd Qu.:1.000 3rd Qu.:18.00
## Max. :4.000 Max. :2.000 Max. :2.000 Max. :20.00
## Age Weight_Kg VSBPSYS VSBPDIA
## Min. :55.00 Min. : -1.00 Min. : 90.0 Min. : 43.00
## 1st Qu.:71.00 1st Qu.: 64.67 1st Qu.:122.0 1st Qu.: 68.00
## Median :76.00 Median : 74.39 Median :135.0 Median : 75.00
## Mean :75.49 Mean : 75.28 Mean :135.5 Mean : 74.56
## 3rd Qu.:80.00 3rd Qu.: 84.48 3rd Qu.:146.0 3rd Qu.: 82.00
## Max. :91.00 Max. :137.44 Max. :206.0 Max. :103.00
## VSPULSE VSRESP VSTEMP SymptomeSeverety
## Min. : 40.00 Min. :-1.00 Min. :-1.00 Min. :-4.00000
## 1st Qu.: 58.00 1st Qu.:16.00 1st Qu.:36.10 1st Qu.:-4.00000
## Median : 64.00 Median :16.00 Median :36.40 Median : 1.00000
## Mean : 65.17 Mean :16.68 Mean :36.35 Mean :-0.09812
## 3rd Qu.: 72.00 3rd Qu.:18.00 3rd Qu.:36.70 3rd Qu.: 1.00000
## Max. :100.00 Max. :32.00 Max. :37.70 Max. : 3.00000
## SymptomeChronicity BC.USEA BCVOMIT BCDIARRH
## Min. :-4.0000 Min. :1.000 Min. :1.000 Min. :1.000
## 1st Qu.:-4.0000 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:1.000
## Median : 2.0000 Median :1.000 Median :1.000 Median :1.000
## Mean : 0.6277 Mean :1.032 Mean :1.016 Mean :1.097
## 3rd Qu.: 2.0000 3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:1.000
## Max. : 3.0000 Max. :2.000 Max. :2.000 Max. :2.000
## BCCONSTP BCABDOMN BCSWEATN BCDIZZY
## Min. :1.000 Min. :1.000 Min. :1.000 Min. :1.000
## 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:1.000
## Median :1.000 Median :1.000 Median :1.000 Median :1.000
## Mean :1.106 Mean :1.074 Mean :1.056 Mean :1.125
## 3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:1.000
## Max. :2.000 Max. :2.000 Max. :2.000 Max. :2.000
## BCENERGY BCDROWSY BCVISION BCHDACHE
## Min. :1.0 Min. :1.00 Min. :1.000 Min. :1.000
## 1st Qu.:1.0 1st Qu.:1.00 1st Qu.:1.000 1st Qu.:1.000
## Median :1.0 Median :1.00 Median :1.000 Median :1.000
## Mean :1.2 Mean :1.13 Mean :1.059 Mean :1.093
## 3rd Qu.:1.0 3rd Qu.:1.00 3rd Qu.:1.000 3rd Qu.:1.000
## Max. :2.0 Max. :2.00 Max. :2.000 Max. :2.000
## BCDRYMTH BCBREATH BCCOUGH BCPALPIT
## Min. :1.000 Min. :1.000 Min. :1.000 Min. :1.000
## 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:1.000
## Median :1.000 Median :1.000 Median :1.000 Median :1.000
## Mean :1.087 Mean :1.078 Mean :1.116 Mean :1.031
## 3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:1.000
## Max. :2.000 Max. :2.000 Max. :2.000 Max. :2.000
## BCCHEST BCURNDIS BCURNFRQ BCANKLE
## Min. :1.000 Min. :1.000 Min. :1.000 Min. :1.000
## 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:1.000
## Median :1.000 Median :1.000 Median :1.000 Median :1.000
## Mean :1.017 Mean :1.023 Mean :1.218 Mean :1.078
## 3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:1.000
## Max. :2.000 Max. :2.000 Max. :2.000 Max. :2.000
## BCMUSCLE BCRASH BCINSOMN BCDPMOOD
## Min. :1.000 Min. :1.000 Min. :1.000 Min. :1.000
## 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:1.000
## Median :1.000 Median :1.000 Median :1.000 Median :1.000
## Mean :1.364 Mean :1.073 Mean :1.112 Mean :1.122
## 3rd Qu.:2.000 3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:1.000
## Max. :2.000 Max. :2.000 Max. :2.000 Max. :2.000
## BCCRYING BCELMOOD BCWANDER BCFALL
## Min. :1.000 Min. :1.000 Min. :1.000 Min. :1.000
## 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:1.000 1st Qu.:1.000
## Median :1.000 Median :1.000 Median :1.000 Median :1.000
## Mean :1.035 Mean :1.012 Mean :1.004 Mean :1.046
## 3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:1.000
## Max. :2.000 Max. :2.000 Max. :2.000 Max. :2.000
## BCOTHER CTWHITE CTRED PROTEIN
## Min. :1.000 Min. :-1.0000 Min. : -1.00 Min. : -1.00
## 1st Qu.:1.000 1st Qu.: 0.0000 1st Qu.: 0.00 1st Qu.: 0.00
## Median :1.000 Median : 0.0000 Median : 0.00 Median : 23.00
## Mean :1.046 Mean : 0.6935 Mean : 91.82 Mean : 23.53
## 3rd Qu.:1.000 3rd Qu.: 1.0000 3rd Qu.: 3.00 3rd Qu.: 42.00
## Max. :2.000 Max. :32.0000 Max. :5000.00 Max. :244.00
## GLUCOSE ApoEGeneAllele1 ApoEGeneAllele2 CDMEMORY
## Min. : -1.00 Min. :2.000 Min. :2.000 Min. :0
## 1st Qu.: 0.00 1st Qu.:3.000 1st Qu.:3.000 1st Qu.:0
## Median : 34.00 Median :3.000 Median :3.000 Median :0
## Mean : 29.98 Mean :3.023 Mean :3.489 Mean :0
## 3rd Qu.: 59.00 3rd Qu.:3.000 3rd Qu.:4.000 3rd Qu.:0
## Max. :100.00 Max. :4.000 Max. :4.000 Max. :0
## CDORIENT CDJUDGE CDCOMMUN CDHOME
## Min. :0.0000 Min. :0.0000 Min. :0.0000 Min. :0.0000
## 1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.0000
## Median :0.5000 Median :0.0000 Median :0.5000 Median :0.0000
## Mean :0.5047 Mean :0.3085 Mean :0.3683 Mean :0.2513
## 3rd Qu.:1.0000 3rd Qu.:0.5000 3rd Qu.:0.5000 3rd Qu.:0.5000
## Max. :2.0000 Max. :2.0000 Max. :2.0000 Max. :2.0000
## CDCARE CDGLOBAL
## Min. :0.0000 Min. :0.0000
## 1st Qu.:0.0000 1st Qu.:0.0000
## Median :0.0000 Median :0.0000
## Mean :0.2849 Mean :0.0672
## 3rd Qu.:0.5000 3rd Qu.:0.0000
## Max. :2.0000 Max. :2.0000
mu<-apply(ad_data, 2, mean)
mean(mu)
## [1] 11.7855
ad.center<-as.matrix(ad_data)-mean(mu)
S<-cov(ad.center)
eigen(S)
## eigen() decomposition
## $values
## [1] 2.273988e+05 1.484903e+03 3.337903e+02 2.200047e+02 1.264698e+02
## [6] 1.073487e+02 7.522069e+01 7.058054e+01 3.931341e+01 1.480602e+01
## [11] 1.230736e+01 9.649142e+00 8.238088e+00 3.151439e+00 2.455463e+00
## [16] 1.944325e+00 1.730617e+00 8.819886e-01 3.431030e-01 2.956609e-01
## [21] 2.640353e-01 2.479452e-01 1.826721e-01 1.712922e-01 1.623043e-01
## [26] 1.383527e-01 1.361698e-01 1.223317e-01 1.048175e-01 1.007915e-01
## [31] 9.107279e-02 8.979152e-02 8.551339e-02 8.402801e-02 8.083781e-02
## [36] 7.769321e-02 7.549186e-02 6.890471e-02 6.376745e-02 6.069233e-02
## [41] 5.863117e-02 5.580901e-02 5.242103e-02 4.903965e-02 4.703119e-02
## [46] 4.509127e-02 4.400682e-02 4.140577e-02 3.382897e-02 2.910121e-02
## [51] 2.704179e-02 2.515083e-02 2.305273e-02 2.010289e-02 1.402210e-02
## [56] 1.028087e-02 8.480327e-03 8.322598e-03 3.567425e-03 4.843097e-18
## [61] -2.826186e-17 -1.586071e-12
##
## $vectors
## [,1] [,2] [,3] [,4]
## [1,] -6.155702e-05 -1.352603e-03 -8.909184e-03 -1.940151e-02
## [2,] -4.210949e-04 1.877305e-03 1.265315e-02 3.038370e-02
## [3,] 2.414885e-05 1.965340e-03 1.971604e-03 3.377503e-04
## [4,] 6.582141e-04 -1.515883e-03 4.688771e-03 4.287574e-02
## [5,] 3.570981e-05 -1.419637e-05 3.970545e-03 1.177157e-02
## [6,] -3.763502e-06 6.197425e-04 1.573625e-03 5.726667e-03
## [7,] -4.336864e-06 -1.722701e-04 8.056246e-05 4.235859e-04
## [8,] -1.161639e-05 -3.989289e-04 7.008365e-04 3.828828e-04
## [9,] -3.651363e-05 6.382024e-04 -1.736163e-03 8.948786e-04
## [10,] -6.401732e-06 -1.181770e-03 -2.350600e-03 1.708952e-02
## [11,] -2.300120e-05 -3.782290e-04 -5.251334e-04 -4.161944e-04
## [12,] 2.616653e-04 1.687544e-03 -5.687045e-04 -1.938043e-02
## [13,] -2.092224e-04 -4.302170e-03 2.656760e-02 7.562373e-02
## [14,] -5.807990e-05 4.318975e-02 1.899525e-01 -9.736371e-01
## [15,] 2.269615e-03 -3.204045e-02 9.333636e-01 1.946427e-01
## [16,] 1.398577e-03 -1.207940e-02 2.971808e-01 7.140173e-04
## [17,] -2.468176e-04 4.384694e-04 -1.116993e-02 3.998310e-02
## [18,] 3.699501e-04 1.842257e-03 2.481977e-02 3.271946e-03
## [19,] -3.136294e-05 -1.466479e-03 -2.618050e-03 7.902005e-03
## [20,] 1.989696e-04 -9.551260e-04 1.178988e-02 4.543423e-03
## [21,] 2.332669e-04 -1.305606e-03 1.148469e-02 5.186969e-03
## [22,] 5.575407e-06 -2.133684e-04 -1.062372e-04 -7.063601e-04
## [23,] -4.932632e-06 -2.167342e-04 -1.085667e-04 -1.892471e-04
## [24,] 2.313422e-05 3.292016e-04 2.426065e-05 -6.287171e-04
## [25,] 4.204160e-05 9.784808e-05 1.463824e-03 4.710872e-04
## [26,] -1.741155e-05 1.719273e-04 8.490958e-04 -3.482829e-04
## [27,] 1.416661e-05 8.082712e-05 -1.852431e-05 -3.037064e-04
## [28,] -2.718276e-06 -3.042693e-04 5.266829e-04 -7.938126e-04
## [29,] -2.263992e-05 1.030004e-04 6.489960e-04 1.088146e-03
## [30,] -9.137126e-06 1.585971e-04 5.740529e-04 -1.422117e-03
## [31,] -5.525276e-06 1.702923e-04 6.454930e-04 -5.480530e-06
## [32,] -9.819773e-06 -4.016926e-05 -6.812403e-04 7.624784e-04
## [33,] -2.795354e-05 9.048362e-05 5.177937e-04 -1.501839e-04
## [34,] -2.655230e-05 9.309455e-05 1.334738e-03 -2.831617e-03
## [35,] -2.890434e-05 -1.304161e-05 -8.419338e-04 -4.737127e-04
## [36,] -1.084916e-05 -2.419664e-04 -8.457735e-05 -5.974614e-04
## [37,] -6.692420e-06 -7.785247e-05 -1.717683e-04 -7.306098e-04
## [38,] -8.102982e-06 -4.476973e-05 -1.846839e-04 2.162969e-04
## [39,] 1.641410e-06 2.555279e-04 6.646750e-04 -1.424932e-03
## [40,] -2.892499e-05 3.009721e-04 1.246280e-03 -1.740278e-03
## [41,] -1.090296e-04 5.801924e-04 7.219353e-04 -5.370626e-05
## [42,] -2.347564e-05 -4.505424e-04 -2.452083e-05 -2.085732e-03
## [43,] -2.134112e-05 -1.598816e-04 4.626754e-04 -1.317513e-03
## [44,] 1.464197e-05 2.308990e-04 -3.244671e-05 1.989316e-03
## [45,] 3.372881e-06 -4.603566e-06 1.130441e-04 8.080159e-04
## [46,] -4.789086e-06 6.948022e-05 1.084393e-04 -5.342210e-04
## [47,] -3.906907e-08 4.573646e-05 -5.319505e-05 2.654087e-04
## [48,] 6.733117e-06 -1.435489e-04 2.804581e-04 -5.081075e-04
## [49,] 6.733117e-06 -1.435489e-04 2.804581e-04 -5.081075e-04
## [50,] 4.905417e-04 2.062418e-02 2.389320e-03 -1.335806e-03
## [51,] 9.998353e-01 -1.773356e-02 -3.051810e-03 -1.332538e-03
## [52,] 1.289398e-02 6.544635e-01 4.811060e-02 1.951235e-02
## [53,] 1.243991e-02 7.535612e-01 -8.278296e-03 4.761803e-02
## [54,] -4.713070e-07 -1.610034e-04 2.020041e-03 -9.431714e-04
## [55,] 4.299839e-05 2.732923e-05 -3.614264e-04 2.375737e-03
## [56,] 0.000000e+00 0.000000e+00 0.000000e+00 0.000000e+00
## [57,] 4.154234e-05 2.960720e-04 7.139035e-04 3.466371e-03
## [58,] 2.180676e-05 3.801206e-05 6.707359e-05 3.844507e-03
## [59,] -1.414548e-05 -4.080970e-04 6.910383e-04 1.782564e-03
## [60,] -2.266327e-05 1.510057e-04 3.230131e-04 2.185121e-03
## [61,] 3.107873e-06 -1.616404e-04 8.903211e-04 1.475024e-03
## [62,] 6.061600e-06 7.045117e-05 1.285196e-03 -9.820192e-04
## [,5] [,6] [,7] [,8]
## [1,] 1.326615e-02 5.684621e-02 1.989729e-01 -1.058384e-01
## [2,] -2.890866e-02 -1.417176e-01 -5.879515e-01 3.165808e-01
## [3,] -6.185997e-03 -8.707364e-03 -2.136681e-02 1.638992e-02
## [4,] -2.855414e-02 -1.385223e-01 -5.741243e-01 2.824316e-01
## [5,] -6.998017e-03 -4.274906e-02 -1.507234e-01 8.366138e-02
## [6,] -2.572088e-03 -1.923409e-02 -5.450953e-02 2.700456e-02
## [7,] 7.701299e-05 -1.772468e-04 -4.328264e-07 2.135048e-04
## [8,] 4.265150e-04 -2.038927e-03 -2.510301e-05 4.053892e-03
## [9,] 3.222018e-03 1.985894e-03 2.885131e-03 -3.204839e-03
## [10,] 3.777095e-03 8.754270e-03 -1.046450e-03 -7.682845e-04
## [11,] -4.438914e-04 -8.725425e-06 -1.793807e-03 -2.746331e-03
## [12,] 6.104540e-03 -8.043107e-03 4.362255e-02 -5.173864e-02
## [13,] -5.651815e-02 -7.091671e-02 2.253323e-01 3.554834e-01
## [14,] 2.025830e-02 -2.689983e-03 -5.616504e-03 1.070378e-01
## [15,] 3.703783e-02 -1.035180e-01 1.422176e-01 1.766161e-01
## [16,] 1.956675e-02 3.652874e-01 -4.250756e-01 -6.648251e-01
## [17,] 7.111529e-02 8.933035e-01 1.226509e-03 4.267493e-01
## [18,] 9.792714e-03 2.383278e-02 1.558123e-02 5.518912e-02
## [19,] -2.102881e-03 6.128108e-03 -2.556715e-03 4.583210e-03
## [20,] 3.283048e-04 -1.236071e-02 3.338412e-03 1.220428e-02
## [21,] 5.851722e-04 -1.414162e-02 3.647780e-03 1.276083e-02
## [22,] -6.509274e-05 -1.118490e-03 -3.201052e-03 2.189663e-03
## [23,] -2.853108e-05 -1.116648e-05 -2.431140e-03 1.798005e-03
## [24,] 9.746335e-04 -1.446351e-03 -1.244159e-03 1.642457e-03
## [25,] 8.908748e-04 -4.260424e-04 2.470143e-03 4.371073e-05
## [26,] 6.644611e-04 -5.617642e-04 2.436396e-04 -1.504400e-04
## [27,] -8.706114e-04 -1.059161e-03 -6.859337e-04 -6.942791e-04
## [28,] -4.709844e-05 -1.415554e-03 -1.040072e-03 2.946316e-03
## [29,] -1.030674e-03 -9.911228e-04 -5.759925e-03 6.706677e-03
## [30,] -1.297712e-04 -1.451036e-03 -5.037772e-03 4.944749e-03
## [31,] -4.472140e-05 -5.307785e-04 2.834514e-03 3.584788e-04
## [32,] 9.390590e-04 -6.723425e-04 -1.522541e-03 -3.405222e-04
## [33,] -1.106779e-03 1.201572e-03 2.658841e-03 1.978882e-03
## [34,] -7.179465e-04 1.247484e-03 1.697564e-03 3.665055e-03
## [35,] 9.322444e-04 1.950443e-03 -3.618741e-04 2.406603e-03
## [36,] -3.377478e-04 1.907946e-05 -9.650655e-04 2.179086e-04
## [37,] 4.183455e-04 4.792549e-04 4.738701e-04 -1.046117e-04
## [38,] -8.752531e-04 -3.055274e-04 1.044668e-04 1.379422e-04
## [39,] -9.727083e-04 4.110665e-05 3.780894e-03 -2.315070e-04
## [40,] -2.770100e-04 2.523075e-04 2.538949e-03 3.005655e-03
## [41,] -1.990991e-03 5.416926e-04 -1.529176e-03 1.528740e-04
## [42,] 7.652908e-04 1.072669e-03 9.986127e-04 2.218565e-04
## [43,] -5.733293e-04 9.332700e-04 2.864285e-03 6.653631e-05
## [44,] -1.890436e-03 -1.791149e-03 -4.522134e-03 1.937820e-03
## [45,] 2.151786e-04 -4.852156e-08 -1.335931e-03 8.651699e-04
## [46,] -3.514617e-05 -3.737307e-04 -5.772106e-04 -8.706081e-04
## [47,] 2.169596e-04 -6.973846e-04 -2.228415e-04 4.332802e-04
## [48,] -2.163212e-04 -9.621731e-04 -1.833074e-04 -1.329928e-04
## [49,] -2.163212e-04 -9.621731e-04 -1.833074e-04 -1.329928e-04
## [50,] -1.537582e-02 1.599316e-03 -4.384830e-03 -1.612975e-03
## [51,] 1.461943e-03 -1.724441e-04 3.952837e-04 7.682901e-04
## [52,] -7.497515e-01 6.134420e-02 1.766603e-02 -1.400339e-02
## [53,] 6.519957e-01 -5.248466e-02 -1.374639e-02 4.275323e-03
## [54,] 7.801230e-04 -3.961124e-03 -9.367450e-03 -1.298229e-03
## [55,] 2.389847e-03 -6.111752e-03 -1.255183e-02 2.856039e-03
## [56,] 0.000000e+00 0.000000e+00 0.000000e+00 0.000000e+00
## [57,] -1.228579e-03 -1.013425e-02 -2.949791e-02 1.614630e-02
## [58,] -2.350297e-03 -6.775775e-03 -2.916646e-02 1.548480e-02
## [59,] -9.222964e-04 -8.203235e-03 -2.676550e-02 1.250070e-02
## [60,] -1.401354e-03 -7.209788e-03 -2.724443e-02 1.590797e-02
## [61,] -5.646310e-04 -7.971956e-03 -2.944256e-02 1.680924e-02
## [62,] -5.308590e-04 -2.454059e-03 -8.606509e-03 6.812360e-03
## [,9] [,10] [,11] [,12]
## [1,] 1.457989e-02 -5.214343e-02 -1.961801e-02 7.617439e-02
## [2,] -8.619085e-03 -6.468971e-01 -2.379883e-01 -1.509098e-02
## [3,] 7.517505e-03 -1.132522e-02 4.160133e-02 -1.598316e-02
## [4,] -8.555836e-03 6.695386e-01 2.372422e-01 8.945251e-02
## [5,] 3.282142e-03 -5.841749e-02 -3.572657e-02 -1.540069e-02
## [6,] 5.294791e-03 2.050345e-03 -1.087438e-03 -1.109514e-02
## [7,] 7.869739e-04 -1.258292e-03 8.616996e-04 -1.352480e-03
## [8,] 1.599970e-03 2.130139e-03 8.327267e-03 -6.631596e-03
## [9,] -4.055714e-03 -3.774395e-03 2.173811e-03 -4.260335e-04
## [10,] 9.457632e-03 -1.085145e-02 7.958688e-03 -7.180155e-03
## [11,] 5.167892e-04 -8.438607e-05 1.808402e-03 3.495209e-03
## [12,] 3.892240e-04 -9.472068e-02 3.138339e-03 3.205135e-01
## [13,] -8.961269e-01 1.414373e-02 -3.336003e-02 5.600987e-02
## [14,] -3.615798e-02 1.235303e-02 3.822565e-03 3.893874e-03
## [15,] 1.584166e-01 1.131246e-02 -1.736457e-02 2.779379e-02
## [16,] -3.928135e-01 -1.159836e-02 2.424626e-03 -1.577216e-02
## [17,] 1.000336e-01 2.800261e-04 1.035017e-02 4.950623e-02
## [18,] -3.820532e-02 2.063467e-02 7.765147e-02 -9.282609e-01
## [19,] -7.191216e-03 -5.189651e-03 -1.888124e-02 -9.022446e-02
## [20,] -1.458015e-02 -2.179875e-01 5.956791e-01 3.503398e-02
## [21,] -2.116529e-02 -2.577284e-01 7.151170e-01 4.015881e-02
## [22,] 1.935152e-03 -3.271508e-03 3.524482e-03 -6.656682e-05
## [23,] -3.640243e-04 -3.981870e-03 4.589406e-04 9.420142e-05
## [24,] 2.650799e-03 -2.546687e-03 1.483213e-02 8.441820e-04
## [25,] 6.488512e-04 -5.715192e-03 1.374261e-02 7.936376e-03
## [26,] -3.012797e-04 -4.458084e-03 9.989613e-03 3.127317e-03
## [27,] 3.997046e-03 -3.015443e-03 6.693285e-03 2.750650e-03
## [28,] -2.800454e-03 -7.086806e-03 1.411552e-02 4.067365e-03
## [29,] 1.448808e-03 -9.885694e-03 2.825936e-02 -6.040189e-05
## [30,] -7.089353e-04 -1.330396e-02 1.577744e-02 -3.062504e-05
## [31,] -3.655722e-03 -4.532767e-03 8.426274e-03 -1.638950e-03
## [32,] 2.892033e-03 -2.479847e-03 1.350832e-02 -3.822239e-03
## [33,] 1.409337e-03 -2.726085e-03 1.360884e-02 7.507012e-04
## [34,] -2.602005e-03 -2.524549e-03 1.050591e-02 -1.896826e-03
## [35,] -8.109045e-04 -9.412475e-03 1.575874e-02 6.461183e-04
## [36,] 8.957301e-05 -1.145453e-03 4.912433e-03 -1.067038e-03
## [37,] -1.303790e-04 -9.999655e-04 2.159089e-03 -1.159279e-03
## [38,] -9.504660e-04 -2.836730e-03 2.452337e-03 -2.453554e-04
## [39,] -8.657923e-03 -1.242979e-02 3.255997e-02 7.224472e-03
## [40,] -7.758989e-05 -3.042739e-03 1.144123e-02 5.805500e-03
## [41,] -3.858503e-03 -2.400244e-02 5.082702e-02 7.971837e-03
## [42,] 1.212968e-03 -2.022593e-03 1.002465e-02 -5.032783e-03
## [43,] -3.149656e-04 -7.596837e-03 1.901771e-02 -1.870193e-03
## [44,] 2.437643e-03 -1.088012e-02 1.731222e-02 -5.379594e-03
## [45,] 1.945166e-03 -2.896102e-03 3.722613e-03 -2.643931e-04
## [46,] 8.617915e-04 -3.061787e-04 1.327452e-03 2.209696e-03
## [47,] -4.073711e-04 1.336861e-04 4.701923e-04 6.231426e-04
## [48,] -5.235421e-04 -1.636075e-03 6.913446e-03 6.332973e-04
## [49,] -5.235421e-04 -1.636075e-03 6.913446e-03 6.332973e-04
## [50,] -5.102499e-03 1.755111e-02 4.263621e-02 -5.246517e-02
## [51,] -4.388236e-06 -6.297937e-04 -5.628882e-04 1.416759e-04
## [52,] 4.100937e-02 -5.402792e-04 2.168583e-03 -2.314372e-03
## [53,] -3.808428e-02 1.972703e-03 -1.536747e-03 6.312553e-03
## [54,] 7.728549e-03 8.365063e-03 2.619989e-03 -3.990253e-03
## [55,] 9.680121e-03 1.364941e-02 -8.132875e-05 -2.704390e-03
## [56,] 0.000000e+00 0.000000e+00 0.000000e+00 0.000000e+00
## [57,] 1.592622e-03 7.719279e-04 -5.094599e-03 -4.467538e-03
## [58,] 1.371085e-03 -9.887032e-03 -6.762876e-03 -4.307217e-03
## [59,] 2.694853e-03 -9.440603e-03 -4.361266e-03 -4.740744e-03
## [60,] 1.598493e-03 -1.699246e-02 -6.183469e-03 -2.534361e-03
## [61,] -1.280819e-03 -1.682619e-02 -1.093603e-02 -2.530481e-03
## [62,] -2.694093e-03 -6.043132e-03 -2.388333e-03 3.179654e-03
## [,13] [,14] [,15] [,16]
## [1,] -0.0879813032 8.736788e-01 1.734968e-01 1.381809e-01
## [2,] -0.0098006953 1.711953e-01 1.222594e-02 6.070405e-02
## [3,] 0.0044654181 -9.589139e-02 1.730123e-02 -3.219811e-01
## [4,] -0.1103799658 1.960369e-01 5.020215e-02 3.486726e-02
## [5,] 0.0179538291 -1.859368e-01 -1.428370e-02 -8.974874e-02
## [6,] 0.0060609840 -1.187287e-01 -1.929845e-02 -3.958888e-02
## [7,] -0.0037317033 1.868672e-03 6.523029e-05 4.566558e-03
## [8,] -0.0096467572 -2.422898e-03 2.267618e-03 1.292108e-02
## [9,] 0.0109202274 4.963767e-02 -9.359229e-03 8.750253e-03
## [10,] 0.0258266945 -1.666984e-05 -1.211388e-02 -2.750441e-03
## [11,] -0.0034672416 7.518152e-03 9.772998e-03 5.897010e-03
## [12,] -0.9262390930 -1.193920e-01 -9.676954e-02 -1.612662e-02
## [13,] 0.0063554516 4.327460e-03 1.669475e-03 1.069383e-03
## [14,] 0.0150190833 -1.758448e-03 1.883216e-03 -8.405724e-03
## [15,] 0.0011631031 6.944028e-03 -2.495077e-03 -2.044892e-03
## [16,] 0.0088273899 -2.416925e-03 7.502217e-03 -2.095647e-04
## [17,] -0.0124872163 -1.388542e-02 -6.148071e-03 -1.603198e-04
## [18,] -0.3350085683 2.139243e-02 4.774029e-02 9.995924e-02
## [19,] -0.0376788856 2.325265e-01 -5.557229e-02 -9.170844e-01
## [20,] 0.0374061723 -6.071940e-03 3.162459e-02 -1.395281e-02
## [21,] 0.0361965638 1.088004e-02 1.486998e-02 -1.604698e-04
## [22,] 0.0006200887 -1.108712e-03 -1.465682e-03 -3.325231e-03
## [23,] 0.0032422556 -6.112611e-04 9.423585e-04 -3.244960e-03
## [24,] 0.0017972085 -3.227914e-03 -2.209577e-03 -6.765533e-03
## [25,] 0.0083874698 -3.622573e-03 9.803201e-03 1.029778e-02
## [26,] 0.0004664047 -5.454619e-03 -3.001856e-03 -1.083535e-02
## [27,] 0.0038592391 -4.125684e-03 -3.668156e-03 -8.111887e-03
## [28,] 0.0011291058 -1.553778e-02 4.434624e-03 -1.995932e-02
## [29,] -0.0075162642 -1.694583e-02 -7.937800e-03 -2.495209e-02
## [30,] -0.0042331833 -3.844601e-03 7.330426e-03 -9.586577e-03
## [31,] -0.0005128038 -5.884526e-03 2.440490e-04 -8.594171e-03
## [32,] 0.0050345227 -7.004732e-03 4.287957e-03 -4.042432e-03
## [33,] 0.0002936124 -1.000085e-03 7.763152e-03 -6.922310e-03
## [34,] 0.0053172747 4.612373e-03 7.581332e-03 -8.790300e-03
## [35,] -0.0019413019 1.542204e-02 -2.337134e-03 1.678831e-03
## [36,] 0.0003722882 -6.802825e-03 2.036233e-03 -6.300815e-03
## [37,] 0.0025657422 -1.118601e-03 -2.573619e-04 -5.813936e-04
## [38,] 0.0026079804 -1.181589e-03 -1.430394e-02 -8.017933e-04
## [39,] -0.0012196401 -1.383244e-03 2.534933e-03 -1.382355e-02
## [40,] -0.0013945696 -7.152940e-03 6.405744e-03 1.607348e-02
## [41,] 0.0097746288 1.018397e-02 3.448641e-03 1.011784e-02
## [42,] 0.0059401167 1.028000e-02 -2.336041e-03 -1.682769e-03
## [43,] -0.0051405568 1.626305e-03 4.965047e-03 -8.299962e-03
## [44,] 0.0020490360 -1.021093e-02 4.570817e-03 -1.061237e-02
## [45,] 0.0016673114 -5.870603e-03 -2.217051e-03 -1.271916e-03
## [46,] 0.0002704217 -5.969102e-04 3.300915e-03 -3.554712e-03
## [47,] -0.0002386077 -7.916731e-04 -9.371149e-04 9.451378e-04
## [48,] -0.0009525339 -3.185838e-03 2.139784e-03 -3.477689e-04
## [49,] -0.0009525339 -3.185838e-03 2.139784e-03 -3.477689e-04
## [50,] 0.0574189906 1.710064e-01 -9.736684e-01 8.240489e-02
## [51,] 0.0003763218 -3.201767e-05 6.342821e-05 -3.824231e-05
## [52,] -0.0060571515 -1.687084e-03 2.481090e-02 1.028380e-03
## [53,] 0.0056515998 -3.051140e-04 5.427169e-03 -3.734507e-03
## [54,] 0.0003109821 -1.806579e-02 5.360930e-03 -1.093057e-02
## [55,] 0.0020879393 -1.897929e-02 1.245318e-02 3.137055e-03
## [56,] 0.0000000000 0.000000e+00 0.000000e+00 0.000000e+00
## [57,] 0.0033595588 -5.716869e-02 -1.480524e-02 -1.978390e-02
## [58,] 0.0039298543 -4.586762e-02 1.974754e-03 -1.541538e-02
## [59,] 0.0082163493 -3.924569e-02 4.167583e-03 -1.405275e-02
## [60,] 0.0053480812 -1.941125e-02 -6.537103e-03 -1.472516e-02
## [61,] -0.0004583390 -2.625990e-02 -5.306918e-03 -1.778501e-02
## [62,] -0.0024416754 2.016370e-03 6.223222e-03 -7.986554e-03
## [,17] [,18] [,19] [,20]
## [1,] -1.841785e-01 2.686130e-01 -3.358478e-02 2.593938e-02
## [2,] -4.683952e-04 -1.486509e-01 -2.596760e-02 3.392442e-03
## [3,] -9.254985e-01 -1.269398e-01 1.091870e-02 8.805439e-03
## [4,] -6.940707e-03 -3.235693e-02 -5.324231e-04 -1.926578e-02
## [5,] -5.269811e-02 8.435087e-01 1.338509e-01 -3.092918e-02
## [6,] -1.740851e-02 1.837838e-01 -1.746863e-01 1.708608e-01
## [7,] 1.993421e-03 -7.630230e-04 -3.424591e-02 8.187501e-02
## [8,] 6.160427e-03 -1.297781e-02 -2.195440e-01 5.777069e-01
## [9,] 2.037139e-02 -1.033568e-01 9.245402e-01 2.392662e-01
## [10,] -4.199799e-03 8.209760e-03 1.052947e-01 -2.996220e-02
## [11,] 4.747424e-03 -5.366574e-03 3.960124e-03 -2.690227e-02
## [12,] 6.121341e-03 -9.583722e-05 1.890197e-02 9.252368e-04
## [13,] -9.619258e-03 6.401365e-03 -3.111088e-03 1.080417e-02
## [14,] 4.836143e-03 1.566593e-03 2.545166e-03 2.109400e-03
## [15,] 3.010193e-03 -3.214601e-03 2.105865e-03 -1.267203e-03
## [16,] -8.483747e-03 7.356284e-03 -2.738686e-03 2.848872e-03
## [17,] 2.774213e-04 2.230427e-03 -1.908760e-03 4.869135e-03
## [18,] -1.924138e-02 7.357621e-03 6.442450e-03 -1.052973e-02
## [19,] 2.980608e-01 -2.954191e-02 -1.307721e-02 9.449213e-03
## [20,] 3.672305e-02 1.664675e-02 6.018873e-03 -1.073487e-01
## [21,] 3.714850e-02 9.956819e-03 -1.868434e-02 1.027530e-01
## [22,] -1.001759e-02 -8.598430e-03 3.109122e-02 -2.973570e-02
## [23,] -5.486258e-03 -2.334759e-03 1.704435e-02 -2.975961e-02
## [24,] -2.411213e-03 -2.974762e-02 1.202869e-03 1.975013e-03
## [25,] -1.925312e-02 2.313797e-03 2.748711e-02 -6.737565e-02
## [26,] -1.091285e-02 -1.154631e-02 -1.228860e-02 -6.644594e-02
## [27,] -1.022145e-02 8.028041e-03 2.740161e-02 8.575676e-03
## [28,] -2.541645e-02 1.917780e-02 -2.211752e-02 -4.170687e-02
## [29,] -4.807530e-02 2.196394e-02 3.065381e-02 -3.179927e-02
## [30,] -2.875763e-02 -1.044704e-03 1.297063e-02 -9.483626e-02
## [31,] -8.783381e-03 -3.157200e-03 -1.604678e-02 -4.299377e-02
## [32,] -3.508402e-03 1.864026e-02 3.361468e-02 2.042622e-02
## [33,] -1.975676e-02 -2.255430e-02 3.217173e-02 -5.591061e-02
## [34,] -2.194985e-02 -3.751548e-03 -7.438886e-04 -2.483536e-02
## [35,] -1.496238e-02 -1.062817e-02 2.864678e-02 -4.537624e-02
## [36,] -1.682087e-02 -1.706306e-03 6.395341e-03 -2.217424e-02
## [37,] -5.838664e-04 -2.850331e-03 1.791252e-02 -2.151673e-02
## [38,] 4.018048e-03 3.093293e-03 5.999450e-03 -1.309542e-02
## [39,] 1.162974e-05 6.882058e-03 1.105265e-02 -5.483613e-02
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## [41,] 4.540645e-03 9.020329e-02 -4.027444e-02 -1.479708e-03
## [42,] 1.153679e-01 -1.892826e-01 7.830389e-02 4.374102e-02
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## [54,] -1.329605e-02 -5.190495e-02 1.330311e-02 2.846242e-02
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## [56,] 0.000000e+00 0.000000e+00 2.775558e-17 0.000000e+00
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## [59,] -1.901284e-02 9.305177e-02 -1.274642e-01 -6.788814e-03
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## [62,] -5.294637e-02 -1.263506e-01 -8.598739e-03 1.083460e-01
## [,37] [,38] [,39] [,40]
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## [4,] 1.613084e-03 1.287580e-03 -3.321860e-03 1.011802e-03
## [5,] -6.915080e-02 2.854091e-02 3.000018e-02 2.309967e-03
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## [7,] -1.644043e-02 3.887599e-02 2.515326e-02 -2.798968e-02
## [8,] -7.775148e-02 3.544601e-02 5.488871e-02 -8.917067e-03
## [9,] 3.581154e-02 3.798808e-02 1.479934e-02 2.322732e-02
## [10,] 9.407875e-03 3.972002e-02 -1.715142e-01 1.086286e-01
## [11,] -6.035163e-01 2.091203e-01 1.519174e-01 1.756089e-01
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## [13,] -2.884677e-03 -5.057130e-03 -1.405044e-03 -1.448276e-03
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## [15,] -1.208951e-03 -5.345304e-04 -1.266524e-03 1.684671e-03
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## [17,] -2.886556e-04 4.530826e-04 -1.612551e-04 -9.493999e-04
## [18,] 2.034321e-03 1.963695e-03 8.728249e-04 -1.544363e-03
## [19,] -3.509305e-03 2.400895e-03 1.521546e-02 -1.383602e-02
## [20,] -4.701515e-02 2.202449e-02 -2.533671e-02 -2.066525e-02
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## [33,] -2.169277e-02 6.882307e-02 3.010153e-01 -5.808597e-01
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## [35,] -1.482330e-01 7.088487e-02 -1.819482e-01 1.718431e-01
## [36,] 1.502052e-02 -8.523131e-02 1.072871e-01 5.435377e-02
## [37,] -1.352359e-02 -1.882477e-02 2.934121e-02 1.265079e-02
## [38,] -2.334351e-02 -3.990573e-02 -7.247742e-02 -2.874452e-02
## [39,] 6.239898e-02 4.049653e-02 -8.818349e-02 1.271105e-01
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## [51,] -6.474215e-06 1.189665e-05 1.667807e-05 -4.821989e-07
## [52,] 4.810350e-04 -9.763268e-04 -1.501116e-03 8.948250e-04
## [53,] -4.029234e-04 4.162311e-04 9.442471e-04 -4.060640e-04
## [54,] 2.328733e-02 5.988111e-02 -3.867067e-03 -6.455678e-02
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## [57,] 4.111030e-02 8.929512e-02 5.657061e-02 1.193477e-01
## [58,] -2.786064e-02 -7.705708e-02 2.807609e-01 3.775553e-01
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## [62,] -6.822336e-02 1.698327e-01 -1.113484e-01 -1.313376e-01
## [,41] [,42] [,43] [,44]
## [1,] 1.984765e-03 -1.306404e-02 4.865200e-03 1.231480e-02
## [2,] 3.347025e-03 4.788102e-03 -1.000333e-03 1.794265e-03
## [3,] -5.933514e-03 -9.426794e-04 9.171325e-03 5.224730e-03
## [4,] -1.573111e-03 -1.105002e-03 8.935914e-04 -9.228921e-05
## [5,] 7.243072e-03 -4.376044e-02 3.093439e-02 2.935289e-02
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## [13,] -3.060853e-03 -2.675924e-03 -4.070352e-04 2.025547e-03
## [14,] -2.367504e-03 -2.593533e-03 2.359019e-04 8.805119e-04
## [15,] -5.053195e-04 -4.002247e-04 2.949729e-04 -2.901274e-04
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## [56,] -1.831868e-15 -3.053113e-16 -1.165734e-15 1.061651e-15
## [57,] -2.284601e-02 7.510126e-02 6.665085e-02 1.011920e-01
## [58,] -9.342781e-03 -1.901213e-01 4.687612e-01 2.705046e-01
## [59,] 9.938289e-02 -2.424404e-01 7.205893e-02 -3.765136e-01
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## [62,] 1.192224e-01 2.852791e-02 -2.083087e-01 2.032012e-01
## [,45] [,46] [,47] [,48]
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## [3,] 3.163269e-03 5.418544e-03 7.717967e-03 1.390531e-02
## [4,] -2.080325e-03 -1.999294e-03 -2.615444e-03 6.278129e-04
## [5,] 2.897767e-02 -1.299065e-02 -1.777348e-02 -1.607390e-02
## [6,] 1.008771e-01 6.119192e-02 1.652097e-01 -6.853794e-02
## [7,] 2.707762e-03 1.494788e-02 1.127772e-02 1.102258e-02
## [8,] 1.511102e-02 -6.837877e-03 -1.444093e-02 -1.137230e-03
## [9,] 2.585042e-02 4.213196e-03 2.948803e-03 -5.109362e-02
## [10,] -1.272437e-02 -1.542482e-02 1.972990e-02 -3.958311e-02
## [11,] -1.394216e-01 2.463115e-02 3.681952e-02 8.315697e-02
## [12,] -2.306534e-03 -7.381081e-04 -5.077597e-03 -7.353921e-03
## [13,] -3.548837e-04 1.851647e-03 -4.559597e-03 1.238042e-03
## [14,] -1.533574e-03 -1.012383e-03 -5.208754e-04 7.712490e-04
## [15,] -8.412924e-04 5.800642e-04 -4.393836e-05 -4.707291e-06
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## [50,] -1.630982e-03 -1.235003e-02 2.916713e-05 5.080012e-03
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## [62,] 2.471735e-02 -4.010004e-02 2.002123e-02 -3.750984e-02
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## [34,] -1.232715e-02 -3.069616e-02 1.103077e-02 -4.067351e-17
## [35,] 1.288787e-02 3.161750e-02 -8.291920e-03 2.501935e-17
## [36,] -6.197782e-03 -9.885016e-03 -2.289855e-03 1.218401e-16
## [37,] 1.320132e-03 9.698265e-02 -3.751688e-05 8.829873e-17
## [38,] -2.521041e-02 2.007933e-01 1.724587e-02 -2.476255e-16
## [39,] -5.253593e-03 -2.420566e-03 -2.145314e-03 3.243812e-17
## [40,] -8.137718e-03 1.505328e-02 5.162343e-03 -1.129608e-16
## [41,] -4.301639e-03 -2.213220e-02 5.768241e-03 2.083644e-17
## [42,] -3.067449e-03 1.737918e-02 9.792178e-05 -1.755409e-17
## [43,] -5.336038e-03 -2.528709e-02 7.474483e-03 1.243203e-17
## [44,] -6.153651e-03 -2.181243e-02 -2.405004e-02 5.406438e-17
## [45,] -1.323172e-02 5.206600e-02 2.198095e-02 2.319926e-16
## [46,] -8.790511e-02 2.670471e-01 9.650490e-03 -7.228507e-17
## [47,] 1.866225e-02 -5.867324e-03 9.965992e-01 -5.982164e-17
## [48,] 4.280090e-04 5.384495e-03 2.067548e-04 2.997404e-01
## [49,] 4.280090e-04 5.384495e-03 2.067548e-04 -2.997404e-01
## [50,] 1.270994e-03 -4.181840e-03 -8.565836e-04 2.842693e-18
## [51,] -1.790519e-06 -2.068861e-06 4.268231e-06 1.266483e-20
## [52,] -3.016824e-05 -1.875568e-05 2.262789e-04 1.901227e-19
## [53,] -1.425256e-04 -7.861903e-06 -2.145727e-04 1.983922e-20
## [54,] 4.267458e-03 2.927459e-04 1.380161e-02 -1.773174e-17
## [55,] -1.543013e-03 -1.765504e-02 -7.923575e-03 3.032883e-17
## [56,] 1.084202e-19 6.505213e-19 1.058791e-21 9.057105e-01
## [57,] 2.916658e-02 3.346918e-02 -4.144528e-02 1.082938e-09
## [58,] 5.824185e-04 -3.001989e-02 -7.973970e-03 1.082938e-09
## [59,] -9.546486e-03 -1.588829e-02 5.826267e-03 1.082938e-09
## [60,] -6.496003e-04 1.031374e-02 1.736273e-02 1.082938e-09
## [61,] -1.864392e-02 -2.163256e-02 1.906554e-02 1.082938e-09
## [62,] -2.961485e-04 3.164583e-02 6.730508e-03 1.082937e-09
## [,61] [,62]
## [1,] 0.000000e+00 -2.704523e-12
## [2,] -3.295616e-17 -2.205307e-12
## [3,] 4.184590e-17 6.374790e-12
## [4,] 1.864769e-17 2.377288e-13
## [5,] -2.313835e-09 3.779645e-01
## [6,] 1.080463e-15 9.662802e-12
## [7,] 7.631317e-16 8.786228e-10
## [8,] -3.558635e-16 -1.336409e-10
## [9,] -3.594760e-16 -2.990371e-12
## [10,] 1.045447e-15 -1.000926e-11
## [11,] 2.258990e-15 3.661688e-11
## [12,] -5.954730e-17 -1.585566e-12
## [13,] -8.222043e-17 1.014295e-12
## [14,] 4.048536e-17 2.532567e-13
## [15,] 3.390855e-18 1.898824e-13
## [16,] 1.069477e-18 -1.633462e-13
## [17,] -3.181617e-17 2.341068e-13
## [18,] -7.292032e-17 -1.767357e-12
## [19,] -1.704594e-16 1.430334e-12
## [20,] -2.565436e-16 1.361546e-13
## [21,] 4.758764e-17 6.275194e-13
## [22,] -2.862691e-16 1.352847e-10
## [23,] 2.781820e-15 -1.230506e-11
## [24,] 1.385644e-15 -4.347445e-12
## [25,] -1.798514e-15 -4.520738e-11
## [26,] 2.593213e-15 -4.451912e-11
## [27,] -1.300529e-14 2.808309e-11
## [28,] -1.572097e-15 -3.174050e-11
## [29,] 5.423106e-16 -1.670225e-11
## [30,] -4.664979e-15 -2.594625e-11
## [31,] 1.035946e-14 2.837805e-11
## [32,] 4.854405e-15 1.956515e-11
## [33,] 7.893853e-15 -4.135374e-11
## [34,] 6.011162e-16 5.245288e-12
## [35,] -1.147655e-16 6.581715e-12
## [36,] 1.630263e-15 1.500230e-11
## [37,] 5.459640e-16 4.127680e-12
## [38,] 2.672148e-15 1.281329e-11
## [39,] 2.661032e-16 2.215907e-12
## [40,] -2.391442e-15 6.363008e-13
## [41,] 9.279394e-16 5.678928e-12
## [42,] -3.816195e-15 -1.117991e-13
## [43,] 1.303070e-16 1.140341e-11
## [44,] 1.460751e-15 1.213967e-11
## [45,] -8.640340e-16 1.534540e-11
## [46,] -1.613296e-15 -1.642864e-11
## [47,] -1.258925e-17 4.140228e-12
## [48,] 6.404340e-01 4.780826e-09
## [49,] -6.404340e-01 -4.778054e-09
## [50,] -1.008814e-16 -4.771733e-13
## [51,] 6.674521e-19 1.466930e-15
## [52,] 1.861167e-18 -7.313535e-14
## [53,] -9.724970e-18 2.601524e-13
## [54,] -9.293535e-16 2.882118e-12
## [55,] 1.401389e-15 5.628087e-12
## [56,] -4.238969e-01 1.471046e-15
## [57,] 2.313836e-09 -3.779645e-01
## [58,] 2.313834e-09 -3.779645e-01
## [59,] 2.313822e-09 -3.779645e-01
## [60,] 2.313840e-09 -3.779645e-01
## [61,] 2.313842e-09 -3.779645e-01
## [62,] 2.313834e-09 -3.779645e-01
pcal <- prcomp(as.matrix(ad_data), center = T)
summary(pcal)
## Importance of components:
## PC1 PC2 PC3 PC4 PC5
## Standard deviation 476.864 38.53444 18.26993 14.83256 11.24588
## Proportion of Variance 0.989 0.00646 0.00145 0.00096 0.00055
## Cumulative Proportion 0.989 0.99551 0.99697 0.99792 0.99847
## PC6 PC7 PC8 PC9 PC10 PC11
## Standard deviation 10.36092 8.67299 8.40122 6.27004 3.84786 3.50819
## Proportion of Variance 0.00047 0.00033 0.00031 0.00017 0.00006 0.00005
## Cumulative Proportion 0.99894 0.99927 0.99957 0.99974 0.99981 0.99986
## PC12 PC13 PC14 PC15 PC16 PC17
## Standard deviation 3.10631 2.87021 1.77523 1.56699 1.39439 1.31553
## Proportion of Variance 0.00004 0.00004 0.00001 0.00001 0.00001 0.00001
## Cumulative Proportion 0.99990 0.99994 0.99995 0.99996 0.99997 0.99998
## PC18 PC19 PC20 PC21 PC22 PC23 PC24
## Standard deviation 0.9391 0.5857 0.5437 0.5138 0.4979 0.4274 0.4139
## Proportion of Variance 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
## Cumulative Proportion 1.0000 1.0000 1.0000 1.0000 1.0000 1.0000 1.0000
## PC25 PC26 PC27 PC28 PC29 PC30 PC31
## Standard deviation 0.4029 0.372 0.369 0.3498 0.3238 0.3175 0.3018
## Proportion of Variance 0.0000 0.000 0.000 0.0000 0.0000 0.0000 0.0000
## Cumulative Proportion 1.0000 1.000 1.000 1.0000 1.0000 1.0000 1.0000
## PC32 PC33 PC34 PC35 PC36 PC37 PC38
## Standard deviation 0.2997 0.2924 0.2899 0.2843 0.2787 0.2748 0.2625
## Proportion of Variance 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
## Cumulative Proportion 1.0000 1.0000 1.0000 1.0000 1.0000 1.0000 1.0000
## PC39 PC40 PC41 PC42 PC43 PC44 PC45
## Standard deviation 0.2525 0.2464 0.2421 0.2362 0.229 0.2214 0.2169
## Proportion of Variance 0.0000 0.0000 0.0000 0.0000 0.000 0.0000 0.0000
## Cumulative Proportion 1.0000 1.0000 1.0000 1.0000 1.000 1.0000 1.0000
## PC46 PC47 PC48 PC49 PC50 PC51 PC52
## Standard deviation 0.2123 0.2098 0.2035 0.1839 0.1706 0.1644 0.1586
## Proportion of Variance 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
## Cumulative Proportion 1.0000 1.0000 1.0000 1.0000 1.0000 1.0000 1.0000
## PC53 PC54 PC55 PC56 PC57 PC58 PC59
## Standard deviation 0.1518 0.1418 0.1184 0.1014 0.09209 0.09123 0.05973
## Proportion of Variance 0.0000 0.0000 0.0000 0.0000 0.00000 0.00000 0.00000
## Cumulative Proportion 1.0000 1.0000 1.0000 1.0000 1.00000 1.00000 1.00000
## PC60 PC61 PC62
## Standard deviation 3.731e-14 3.731e-14 3.731e-14
## Proportion of Variance 0.000e+00 0.000e+00 0.000e+00
## Cumulative Proportion 1.000e+00 1.000e+00 1.000e+00
pcal$rotation
## PC1 PC2 PC3 PC4
## MMSCORE -6.155702e-05 1.352603e-03 -8.909184e-03 1.940151e-02
## FAQTOTAL -4.210949e-04 -1.877305e-03 1.265315e-02 -3.038370e-02
## GDTOTAL 2.414885e-05 -1.965340e-03 1.971604e-03 -3.377503e-04
## adascog 6.582141e-04 1.515883e-03 4.688771e-03 -4.287574e-02
## sobcdr 3.570981e-05 1.419637e-05 3.970545e-03 -1.177157e-02
## DXCURREN -3.763502e-06 -6.197425e-04 1.573625e-03 -5.726667e-03
## DX_Conversion -4.336864e-06 1.722701e-04 8.056246e-05 -4.235859e-04
## DXCONTYP -1.161639e-05 3.989289e-04 7.008365e-04 -3.828828e-04
## DX_Confidence -3.651363e-05 -6.382024e-04 -1.736163e-03 -8.948786e-04
## Gender -6.401732e-06 1.181770e-03 -2.350600e-03 -1.708952e-02
## Married -2.300120e-05 3.782290e-04 -5.251334e-04 4.161944e-04
## Education 2.616653e-04 -1.687544e-03 -5.687045e-04 1.938043e-02
## Age -2.092224e-04 4.302170e-03 2.656760e-02 -7.562373e-02
## Weight_Kg -5.807990e-05 -4.318975e-02 1.899525e-01 9.736371e-01
## VSBPSYS 2.269615e-03 3.204045e-02 9.333636e-01 -1.946427e-01
## VSBPDIA 1.398577e-03 1.207940e-02 2.971808e-01 -7.140173e-04
## VSPULSE -2.468176e-04 -4.384694e-04 -1.116993e-02 -3.998310e-02
## VSRESP 3.699501e-04 -1.842257e-03 2.481977e-02 -3.271946e-03
## VSTEMP -3.136294e-05 1.466479e-03 -2.618050e-03 -7.902005e-03
## SymptomeSeverety 1.989696e-04 9.551260e-04 1.178988e-02 -4.543423e-03
## SymptomeChronicity 2.332669e-04 1.305606e-03 1.148469e-02 -5.186969e-03
## BC.USEA 5.575407e-06 2.133684e-04 -1.062372e-04 7.063601e-04
## BCVOMIT -4.932632e-06 2.167342e-04 -1.085667e-04 1.892471e-04
## BCDIARRH 2.313422e-05 -3.292016e-04 2.426065e-05 6.287171e-04
## BCCONSTP 4.204160e-05 -9.784808e-05 1.463824e-03 -4.710872e-04
## BCABDOMN -1.741155e-05 -1.719273e-04 8.490958e-04 3.482829e-04
## BCSWEATN 1.416661e-05 -8.082712e-05 -1.852431e-05 3.037064e-04
## BCDIZZY -2.718276e-06 3.042693e-04 5.266829e-04 7.938126e-04
## BCENERGY -2.263992e-05 -1.030004e-04 6.489960e-04 -1.088146e-03
## BCDROWSY -9.137126e-06 -1.585971e-04 5.740529e-04 1.422117e-03
## BCVISION -5.525276e-06 -1.702923e-04 6.454930e-04 5.480530e-06
## BCHDACHE -9.819773e-06 4.016926e-05 -6.812403e-04 -7.624784e-04
## BCDRYMTH -2.795354e-05 -9.048362e-05 5.177937e-04 1.501839e-04
## BCBREATH -2.655230e-05 -9.309455e-05 1.334738e-03 2.831617e-03
## BCCOUGH -2.890434e-05 1.304161e-05 -8.419338e-04 4.737127e-04
## BCPALPIT -1.084916e-05 2.419664e-04 -8.457735e-05 5.974614e-04
## BCCHEST -6.692420e-06 7.785247e-05 -1.717683e-04 7.306098e-04
## BCURNDIS -8.102982e-06 4.476973e-05 -1.846839e-04 -2.162969e-04
## BCURNFRQ 1.641410e-06 -2.555279e-04 6.646750e-04 1.424932e-03
## BCANKLE -2.892499e-05 -3.009721e-04 1.246280e-03 1.740278e-03
## BCMUSCLE -1.090296e-04 -5.801924e-04 7.219353e-04 5.370626e-05
## BCRASH -2.347564e-05 4.505424e-04 -2.452083e-05 2.085732e-03
## BCINSOMN -2.134112e-05 1.598816e-04 4.626754e-04 1.317513e-03
## BCDPMOOD 1.464197e-05 -2.308990e-04 -3.244671e-05 -1.989316e-03
## BCCRYING 3.372881e-06 4.603566e-06 1.130441e-04 -8.080159e-04
## BCELMOOD -4.789086e-06 -6.948022e-05 1.084393e-04 5.342210e-04
## BCWANDER -3.906907e-08 -4.573646e-05 -5.319505e-05 -2.654087e-04
## BCFALL 6.733117e-06 1.435489e-04 2.804581e-04 5.081075e-04
## BCOTHER 6.733117e-06 1.435489e-04 2.804581e-04 5.081075e-04
## CTWHITE 4.905417e-04 -2.062418e-02 2.389320e-03 1.335806e-03
## CTRED 9.998353e-01 1.773356e-02 -3.051810e-03 1.332538e-03
## PROTEIN 1.289398e-02 -6.544635e-01 4.811060e-02 -1.951235e-02
## GLUCOSE 1.243991e-02 -7.535612e-01 -8.278296e-03 -4.761803e-02
## ApoEGeneAllele1 -4.713070e-07 1.610034e-04 2.020041e-03 9.431714e-04
## ApoEGeneAllele2 4.299839e-05 -2.732923e-05 -3.614264e-04 -2.375737e-03
## CDMEMORY 0.000000e+00 0.000000e+00 0.000000e+00 0.000000e+00
## CDORIENT 4.154234e-05 -2.960720e-04 7.139035e-04 -3.466371e-03
## CDJUDGE 2.180676e-05 -3.801206e-05 6.707359e-05 -3.844507e-03
## CDCOMMUN -1.414548e-05 4.080970e-04 6.910383e-04 -1.782564e-03
## CDHOME -2.266327e-05 -1.510057e-04 3.230131e-04 -2.185121e-03
## CDCARE 3.107873e-06 1.616404e-04 8.903211e-04 -1.475024e-03
## CDGLOBAL 6.061600e-06 -7.045117e-05 1.285196e-03 9.820192e-04
## PC5 PC6 PC7 PC8
## MMSCORE -1.326615e-02 5.684621e-02 -1.989729e-01 1.058384e-01
## FAQTOTAL 2.890866e-02 -1.417176e-01 5.879515e-01 -3.165808e-01
## GDTOTAL 6.185997e-03 -8.707364e-03 2.136681e-02 -1.638992e-02
## adascog 2.855414e-02 -1.385223e-01 5.741243e-01 -2.824316e-01
## sobcdr 6.998017e-03 -4.274906e-02 1.507234e-01 -8.366138e-02
## DXCURREN 2.572088e-03 -1.923409e-02 5.450953e-02 -2.700456e-02
## DX_Conversion -7.701299e-05 -1.772468e-04 4.328265e-07 -2.135048e-04
## DXCONTYP -4.265150e-04 -2.038927e-03 2.510301e-05 -4.053892e-03
## DX_Confidence -3.222018e-03 1.985894e-03 -2.885131e-03 3.204839e-03
## Gender -3.777095e-03 8.754270e-03 1.046450e-03 7.682845e-04
## Married 4.438914e-04 -8.725425e-06 1.793807e-03 2.746331e-03
## Education -6.104540e-03 -8.043107e-03 -4.362255e-02 5.173864e-02
## Age 5.651815e-02 -7.091671e-02 -2.253323e-01 -3.554834e-01
## Weight_Kg -2.025830e-02 -2.689983e-03 5.616504e-03 -1.070378e-01
## VSBPSYS -3.703783e-02 -1.035180e-01 -1.422176e-01 -1.766161e-01
## VSBPDIA -1.956675e-02 3.652874e-01 4.250756e-01 6.648251e-01
## VSPULSE -7.111529e-02 8.933035e-01 -1.226509e-03 -4.267493e-01
## VSRESP -9.792714e-03 2.383278e-02 -1.558123e-02 -5.518912e-02
## VSTEMP 2.102881e-03 6.128108e-03 2.556715e-03 -4.583210e-03
## SymptomeSeverety -3.283048e-04 -1.236071e-02 -3.338412e-03 -1.220428e-02
## SymptomeChronicity -5.851722e-04 -1.414162e-02 -3.647780e-03 -1.276083e-02
## BC.USEA 6.509274e-05 -1.118490e-03 3.201052e-03 -2.189663e-03
## BCVOMIT 2.853108e-05 -1.116648e-05 2.431140e-03 -1.798005e-03
## BCDIARRH -9.746335e-04 -1.446351e-03 1.244159e-03 -1.642457e-03
## BCCONSTP -8.908748e-04 -4.260424e-04 -2.470143e-03 -4.371073e-05
## BCABDOMN -6.644611e-04 -5.617642e-04 -2.436396e-04 1.504400e-04
## BCSWEATN 8.706114e-04 -1.059161e-03 6.859337e-04 6.942791e-04
## BCDIZZY 4.709844e-05 -1.415554e-03 1.040072e-03 -2.946316e-03
## BCENERGY 1.030674e-03 -9.911228e-04 5.759925e-03 -6.706677e-03
## BCDROWSY 1.297712e-04 -1.451036e-03 5.037772e-03 -4.944749e-03
## BCVISION 4.472140e-05 -5.307785e-04 -2.834514e-03 -3.584788e-04
## BCHDACHE -9.390590e-04 -6.723425e-04 1.522541e-03 3.405222e-04
## BCDRYMTH 1.106779e-03 1.201572e-03 -2.658841e-03 -1.978882e-03
## BCBREATH 7.179465e-04 1.247484e-03 -1.697564e-03 -3.665055e-03
## BCCOUGH -9.322444e-04 1.950443e-03 3.618741e-04 -2.406603e-03
## BCPALPIT 3.377478e-04 1.907946e-05 9.650655e-04 -2.179086e-04
## BCCHEST -4.183455e-04 4.792549e-04 -4.738701e-04 1.046117e-04
## BCURNDIS 8.752531e-04 -3.055274e-04 -1.044668e-04 -1.379422e-04
## BCURNFRQ 9.727083e-04 4.110665e-05 -3.780894e-03 2.315070e-04
## BCANKLE 2.770100e-04 2.523075e-04 -2.538949e-03 -3.005655e-03
## BCMUSCLE 1.990991e-03 5.416926e-04 1.529176e-03 -1.528740e-04
## BCRASH -7.652908e-04 1.072669e-03 -9.986127e-04 -2.218565e-04
## BCINSOMN 5.733293e-04 9.332700e-04 -2.864285e-03 -6.653631e-05
## BCDPMOOD 1.890436e-03 -1.791149e-03 4.522134e-03 -1.937820e-03
## BCCRYING -2.151786e-04 -4.852156e-08 1.335931e-03 -8.651699e-04
## BCELMOOD 3.514617e-05 -3.737307e-04 5.772106e-04 8.706081e-04
## BCWANDER -2.169596e-04 -6.973846e-04 2.228415e-04 -4.332802e-04
## BCFALL 2.163212e-04 -9.621731e-04 1.833074e-04 1.329928e-04
## BCOTHER 2.163212e-04 -9.621731e-04 1.833074e-04 1.329928e-04
## CTWHITE 1.537582e-02 1.599316e-03 4.384830e-03 1.612975e-03
## CTRED -1.461943e-03 -1.724441e-04 -3.952837e-04 -7.682901e-04
## PROTEIN 7.497515e-01 6.134420e-02 -1.766603e-02 1.400339e-02
## GLUCOSE -6.519957e-01 -5.248466e-02 1.374639e-02 -4.275323e-03
## ApoEGeneAllele1 -7.801230e-04 -3.961124e-03 9.367450e-03 1.298229e-03
## ApoEGeneAllele2 -2.389847e-03 -6.111752e-03 1.255183e-02 -2.856039e-03
## CDMEMORY 0.000000e+00 0.000000e+00 0.000000e+00 0.000000e+00
## CDORIENT 1.228579e-03 -1.013425e-02 2.949791e-02 -1.614630e-02
## CDJUDGE 2.350297e-03 -6.775775e-03 2.916646e-02 -1.548480e-02
## CDCOMMUN 9.222964e-04 -8.203235e-03 2.676550e-02 -1.250070e-02
## CDHOME 1.401354e-03 -7.209788e-03 2.724443e-02 -1.590797e-02
## CDCARE 5.646310e-04 -7.971956e-03 2.944256e-02 -1.680924e-02
## CDGLOBAL 5.308590e-04 -2.454059e-03 8.606509e-03 -6.812360e-03
## PC9 PC10 PC11 PC12
## MMSCORE -1.457989e-02 5.214343e-02 -1.961801e-02 7.617439e-02
## FAQTOTAL 8.619085e-03 6.468971e-01 -2.379883e-01 -1.509098e-02
## GDTOTAL -7.517505e-03 1.132522e-02 4.160133e-02 -1.598316e-02
## adascog 8.555836e-03 -6.695386e-01 2.372422e-01 8.945251e-02
## sobcdr -3.282142e-03 5.841749e-02 -3.572657e-02 -1.540069e-02
## DXCURREN -5.294791e-03 -2.050345e-03 -1.087438e-03 -1.109514e-02
## DX_Conversion -7.869739e-04 1.258292e-03 8.616996e-04 -1.352480e-03
## DXCONTYP -1.599970e-03 -2.130139e-03 8.327267e-03 -6.631596e-03
## DX_Confidence 4.055714e-03 3.774395e-03 2.173811e-03 -4.260335e-04
## Gender -9.457632e-03 1.085145e-02 7.958688e-03 -7.180155e-03
## Married -5.167892e-04 8.438607e-05 1.808402e-03 3.495209e-03
## Education -3.892240e-04 9.472068e-02 3.138339e-03 3.205135e-01
## Age 8.961269e-01 -1.414373e-02 -3.336003e-02 5.600987e-02
## Weight_Kg 3.615798e-02 -1.235303e-02 3.822565e-03 3.893874e-03
## VSBPSYS -1.584166e-01 -1.131246e-02 -1.736457e-02 2.779379e-02
## VSBPDIA 3.928135e-01 1.159836e-02 2.424626e-03 -1.577216e-02
## VSPULSE -1.000336e-01 -2.800261e-04 1.035017e-02 4.950623e-02
## VSRESP 3.820532e-02 -2.063467e-02 7.765147e-02 -9.282609e-01
## VSTEMP 7.191216e-03 5.189651e-03 -1.888124e-02 -9.022446e-02
## SymptomeSeverety 1.458015e-02 2.179875e-01 5.956791e-01 3.503398e-02
## SymptomeChronicity 2.116529e-02 2.577284e-01 7.151170e-01 4.015881e-02
## BC.USEA -1.935152e-03 3.271508e-03 3.524482e-03 -6.656682e-05
## BCVOMIT 3.640243e-04 3.981870e-03 4.589406e-04 9.420142e-05
## BCDIARRH -2.650799e-03 2.546687e-03 1.483213e-02 8.441820e-04
## BCCONSTP -6.488512e-04 5.715192e-03 1.374261e-02 7.936376e-03
## BCABDOMN 3.012797e-04 4.458084e-03 9.989613e-03 3.127317e-03
## BCSWEATN -3.997046e-03 3.015443e-03 6.693285e-03 2.750650e-03
## BCDIZZY 2.800454e-03 7.086806e-03 1.411552e-02 4.067365e-03
## BCENERGY -1.448808e-03 9.885694e-03 2.825936e-02 -6.040189e-05
## BCDROWSY 7.089353e-04 1.330396e-02 1.577744e-02 -3.062504e-05
## BCVISION 3.655722e-03 4.532767e-03 8.426274e-03 -1.638950e-03
## BCHDACHE -2.892033e-03 2.479847e-03 1.350832e-02 -3.822239e-03
## BCDRYMTH -1.409337e-03 2.726085e-03 1.360884e-02 7.507012e-04
## BCBREATH 2.602005e-03 2.524549e-03 1.050591e-02 -1.896826e-03
## BCCOUGH 8.109045e-04 9.412475e-03 1.575874e-02 6.461183e-04
## BCPALPIT -8.957301e-05 1.145453e-03 4.912433e-03 -1.067038e-03
## BCCHEST 1.303790e-04 9.999655e-04 2.159089e-03 -1.159279e-03
## BCURNDIS 9.504660e-04 2.836730e-03 2.452337e-03 -2.453554e-04
## BCURNFRQ 8.657923e-03 1.242979e-02 3.255997e-02 7.224472e-03
## BCANKLE 7.758989e-05 3.042739e-03 1.144123e-02 5.805500e-03
## BCMUSCLE 3.858503e-03 2.400244e-02 5.082702e-02 7.971837e-03
## BCRASH -1.212968e-03 2.022593e-03 1.002465e-02 -5.032783e-03
## BCINSOMN 3.149656e-04 7.596837e-03 1.901771e-02 -1.870193e-03
## BCDPMOOD -2.437643e-03 1.088012e-02 1.731222e-02 -5.379594e-03
## BCCRYING -1.945166e-03 2.896102e-03 3.722613e-03 -2.643931e-04
## BCELMOOD -8.617915e-04 3.061787e-04 1.327452e-03 2.209696e-03
## BCWANDER 4.073711e-04 -1.336861e-04 4.701923e-04 6.231426e-04
## BCFALL 5.235421e-04 1.636075e-03 6.913446e-03 6.332973e-04
## BCOTHER 5.235421e-04 1.636075e-03 6.913446e-03 6.332973e-04
## CTWHITE 5.102499e-03 -1.755111e-02 4.263621e-02 -5.246517e-02
## CTRED 4.388236e-06 6.297937e-04 -5.628882e-04 1.416759e-04
## PROTEIN -4.100937e-02 5.402792e-04 2.168583e-03 -2.314372e-03
## GLUCOSE 3.808428e-02 -1.972703e-03 -1.536747e-03 6.312553e-03
## ApoEGeneAllele1 -7.728549e-03 -8.365063e-03 2.619989e-03 -3.990253e-03
## ApoEGeneAllele2 -9.680121e-03 -1.364941e-02 -8.132875e-05 -2.704390e-03
## CDMEMORY 0.000000e+00 0.000000e+00 0.000000e+00 0.000000e+00
## CDORIENT -1.592622e-03 -7.719279e-04 -5.094599e-03 -4.467538e-03
## CDJUDGE -1.371085e-03 9.887032e-03 -6.762876e-03 -4.307217e-03
## CDCOMMUN -2.694853e-03 9.440603e-03 -4.361266e-03 -4.740744e-03
## CDHOME -1.598493e-03 1.699246e-02 -6.183469e-03 -2.534361e-03
## CDCARE 1.280819e-03 1.682619e-02 -1.093603e-02 -2.530481e-03
## CDGLOBAL 2.694093e-03 6.043132e-03 -2.388333e-03 3.179654e-03
## PC13 PC14 PC15 PC16
## MMSCORE -0.0879813032 8.736788e-01 1.734968e-01 -1.381809e-01
## FAQTOTAL -0.0098006953 1.711953e-01 1.222594e-02 -6.070405e-02
## GDTOTAL 0.0044654181 -9.589139e-02 1.730123e-02 3.219811e-01
## adascog -0.1103799658 1.960369e-01 5.020215e-02 -3.486726e-02
## sobcdr 0.0179538291 -1.859368e-01 -1.428370e-02 8.974874e-02
## DXCURREN 0.0060609840 -1.187287e-01 -1.929845e-02 3.958888e-02
## DX_Conversion -0.0037317033 1.868672e-03 6.523029e-05 -4.566558e-03
## DXCONTYP -0.0096467572 -2.422898e-03 2.267618e-03 -1.292108e-02
## DX_Confidence 0.0109202274 4.963767e-02 -9.359229e-03 -8.750253e-03
## Gender 0.0258266945 -1.666984e-05 -1.211388e-02 2.750441e-03
## Married -0.0034672416 7.518152e-03 9.772998e-03 -5.897010e-03
## Education -0.9262390930 -1.193920e-01 -9.676954e-02 1.612662e-02
## Age 0.0063554516 4.327460e-03 1.669475e-03 -1.069383e-03
## Weight_Kg 0.0150190833 -1.758448e-03 1.883216e-03 8.405724e-03
## VSBPSYS 0.0011631031 6.944028e-03 -2.495077e-03 2.044892e-03
## VSBPDIA 0.0088273899 -2.416925e-03 7.502217e-03 2.095647e-04
## VSPULSE -0.0124872163 -1.388542e-02 -6.148071e-03 1.603198e-04
## VSRESP -0.3350085683 2.139243e-02 4.774029e-02 -9.995924e-02
## VSTEMP -0.0376788856 2.325265e-01 -5.557229e-02 9.170844e-01
## SymptomeSeverety 0.0374061723 -6.071940e-03 3.162459e-02 1.395281e-02
## SymptomeChronicity 0.0361965638 1.088004e-02 1.486998e-02 1.604698e-04
## BC.USEA 0.0006200887 -1.108712e-03 -1.465682e-03 3.325231e-03
## BCVOMIT 0.0032422556 -6.112611e-04 9.423585e-04 3.244960e-03
## BCDIARRH 0.0017972085 -3.227914e-03 -2.209577e-03 6.765533e-03
## BCCONSTP 0.0083874698 -3.622573e-03 9.803201e-03 -1.029778e-02
## BCABDOMN 0.0004664047 -5.454619e-03 -3.001856e-03 1.083535e-02
## BCSWEATN 0.0038592391 -4.125684e-03 -3.668156e-03 8.111887e-03
## BCDIZZY 0.0011291058 -1.553778e-02 4.434624e-03 1.995932e-02
## BCENERGY -0.0075162642 -1.694583e-02 -7.937800e-03 2.495209e-02
## BCDROWSY -0.0042331833 -3.844601e-03 7.330426e-03 9.586577e-03
## BCVISION -0.0005128038 -5.884526e-03 2.440490e-04 8.594171e-03
## BCHDACHE 0.0050345227 -7.004732e-03 4.287957e-03 4.042432e-03
## BCDRYMTH 0.0002936124 -1.000085e-03 7.763152e-03 6.922310e-03
## BCBREATH 0.0053172747 4.612373e-03 7.581332e-03 8.790300e-03
## BCCOUGH -0.0019413019 1.542204e-02 -2.337134e-03 -1.678831e-03
## BCPALPIT 0.0003722882 -6.802825e-03 2.036233e-03 6.300815e-03
## BCCHEST 0.0025657422 -1.118601e-03 -2.573619e-04 5.813936e-04
## BCURNDIS 0.0026079804 -1.181589e-03 -1.430394e-02 8.017933e-04
## BCURNFRQ -0.0012196401 -1.383244e-03 2.534933e-03 1.382355e-02
## BCANKLE -0.0013945696 -7.152940e-03 6.405744e-03 -1.607348e-02
## BCMUSCLE 0.0097746288 1.018397e-02 3.448641e-03 -1.011784e-02
## BCRASH 0.0059401167 1.028000e-02 -2.336041e-03 1.682769e-03
## BCINSOMN -0.0051405568 1.626305e-03 4.965047e-03 8.299962e-03
## BCDPMOOD 0.0020490360 -1.021093e-02 4.570817e-03 1.061237e-02
## BCCRYING 0.0016673114 -5.870603e-03 -2.217051e-03 1.271916e-03
## BCELMOOD 0.0002704217 -5.969102e-04 3.300915e-03 3.554712e-03
## BCWANDER -0.0002386077 -7.916731e-04 -9.371149e-04 -9.451378e-04
## BCFALL -0.0009525339 -3.185838e-03 2.139784e-03 3.477689e-04
## BCOTHER -0.0009525339 -3.185838e-03 2.139784e-03 3.477689e-04
## CTWHITE 0.0574189906 1.710064e-01 -9.736684e-01 -8.240489e-02
## CTRED 0.0003763218 -3.201767e-05 6.342821e-05 3.824231e-05
## PROTEIN -0.0060571515 -1.687084e-03 2.481090e-02 -1.028380e-03
## GLUCOSE 0.0056515998 -3.051140e-04 5.427169e-03 3.734507e-03
## ApoEGeneAllele1 0.0003109821 -1.806579e-02 5.360930e-03 1.093057e-02
## ApoEGeneAllele2 0.0020879393 -1.897929e-02 1.245318e-02 -3.137055e-03
## CDMEMORY 0.0000000000 0.000000e+00 0.000000e+00 0.000000e+00
## CDORIENT 0.0033595588 -5.716869e-02 -1.480524e-02 1.978390e-02
## CDJUDGE 0.0039298543 -4.586762e-02 1.974754e-03 1.541538e-02
## CDCOMMUN 0.0082163493 -3.924569e-02 4.167583e-03 1.405275e-02
## CDHOME 0.0053480812 -1.941125e-02 -6.537103e-03 1.472516e-02
## CDCARE -0.0004583390 -2.625990e-02 -5.306918e-03 1.778501e-02
## CDGLOBAL -0.0024416754 2.016370e-03 6.223222e-03 7.986554e-03
## PC17 PC18 PC19 PC20
## MMSCORE -1.841785e-01 -2.686130e-01 3.358478e-02 -2.593938e-02
## FAQTOTAL -4.683952e-04 1.486509e-01 2.596760e-02 -3.392442e-03
## GDTOTAL -9.254985e-01 1.269398e-01 -1.091870e-02 -8.805439e-03
## adascog -6.940707e-03 3.235693e-02 5.324231e-04 1.926578e-02
## sobcdr -5.269811e-02 -8.435087e-01 -1.338509e-01 3.092918e-02
## DXCURREN -1.740851e-02 -1.837838e-01 1.746863e-01 -1.708608e-01
## DX_Conversion 1.993421e-03 7.630230e-04 3.424591e-02 -8.187501e-02
## DXCONTYP 6.160427e-03 1.297781e-02 2.195440e-01 -5.777069e-01
## DX_Confidence 2.037139e-02 1.033568e-01 -9.245402e-01 -2.392662e-01
## Gender -4.199799e-03 -8.209760e-03 -1.052947e-01 2.996220e-02
## Married 4.747424e-03 5.366574e-03 -3.960124e-03 2.690227e-02
## Education 6.121341e-03 9.583722e-05 -1.890197e-02 -9.252368e-04
## Age -9.619258e-03 -6.401365e-03 3.111088e-03 -1.080417e-02
## Weight_Kg 4.836143e-03 -1.566593e-03 -2.545166e-03 -2.109400e-03
## VSBPSYS 3.010193e-03 3.214601e-03 -2.105865e-03 1.267203e-03
## VSBPDIA -8.483747e-03 -7.356284e-03 2.738686e-03 -2.848872e-03
## VSPULSE 2.774213e-04 -2.230427e-03 1.908760e-03 -4.869135e-03
## VSRESP -1.924138e-02 -7.357621e-03 -6.442450e-03 1.052973e-02
## VSTEMP 2.980608e-01 2.954191e-02 1.307721e-02 -9.449213e-03
## SymptomeSeverety 3.672305e-02 -1.664675e-02 -6.018873e-03 1.073487e-01
## SymptomeChronicity 3.714850e-02 -9.956819e-03 1.868434e-02 -1.027530e-01
## BC.USEA -1.001759e-02 8.598430e-03 -3.109122e-02 2.973570e-02
## BCVOMIT -5.486258e-03 2.334759e-03 -1.704435e-02 2.975961e-02
## BCDIARRH -2.411213e-03 2.974762e-02 -1.202869e-03 -1.975013e-03
## BCCONSTP -1.925312e-02 -2.313797e-03 -2.748711e-02 6.737565e-02
## BCABDOMN -1.091285e-02 1.154631e-02 1.228860e-02 6.644594e-02
## BCSWEATN -1.022145e-02 -8.028041e-03 -2.740161e-02 -8.575676e-03
## BCDIZZY -2.541645e-02 -1.917780e-02 2.211752e-02 4.170687e-02
## BCENERGY -4.807530e-02 -2.196394e-02 -3.065381e-02 3.179927e-02
## BCDROWSY -2.875763e-02 1.044704e-03 -1.297063e-02 9.483626e-02
## BCVISION -8.783381e-03 3.157200e-03 1.604678e-02 4.299377e-02
## BCHDACHE -3.508402e-03 -1.864026e-02 -3.361468e-02 -2.042622e-02
## BCDRYMTH -1.975676e-02 2.255430e-02 -3.217173e-02 5.591061e-02
## BCBREATH -2.194985e-02 3.751548e-03 7.438886e-04 2.483536e-02
## BCCOUGH -1.496238e-02 1.062817e-02 -2.864678e-02 4.537624e-02
## BCPALPIT -1.682087e-02 1.706306e-03 -6.395341e-03 2.217424e-02
## BCCHEST -5.838664e-04 2.850331e-03 -1.791252e-02 2.151673e-02
## BCURNDIS 4.018048e-03 -3.093293e-03 -5.999450e-03 1.309542e-02
## BCURNFRQ 1.162974e-05 -6.882058e-03 -1.105265e-02 5.483613e-02
## BCANKLE -1.813334e-02 -7.433338e-03 -5.011165e-02 5.449709e-02
## BCMUSCLE -2.675642e-03 1.313485e-02 -4.884253e-02 1.978388e-02
## BCRASH -3.488850e-03 -1.010036e-04 -1.245258e-02 3.451642e-02
## BCINSOMN 2.470422e-03 -1.764969e-02 -3.419974e-02 3.913125e-02
## BCDPMOOD -3.619183e-02 2.557977e-02 -2.517554e-02 -3.017667e-02
## BCCRYING -2.720023e-03 3.970817e-03 3.882463e-03 2.519127e-03
## BCELMOOD 2.185239e-04 -1.597279e-03 5.757573e-03 9.345322e-03
## BCWANDER 6.885599e-04 1.428488e-03 7.447713e-03 1.283398e-03
## BCFALL -6.415190e-03 -6.981268e-03 4.358569e-03 -4.790424e-02
## BCOTHER -6.415190e-03 -6.981268e-03 4.358569e-03 -4.790424e-02
## CTWHITE -6.599240e-02 -2.711622e-02 1.537391e-02 -4.224872e-03
## CTRED -1.482434e-05 9.207152e-05 -2.827644e-05 8.773577e-06
## PROTEIN 5.889680e-03 -1.353124e-03 -2.173097e-03 -2.101313e-03
## GLUCOSE -8.452369e-04 9.073829e-04 2.359060e-03 1.944188e-03
## ApoEGeneAllele1 1.860685e-03 -2.758078e-03 6.720809e-02 -3.284412e-01
## ApoEGeneAllele2 -1.260975e-02 -3.739787e-02 1.611253e-02 -6.225010e-01
## CDMEMORY 0.000000e+00 0.000000e+00 2.847806e-28 1.272875e-26
## CDORIENT -1.500097e-02 -1.538439e-01 5.811735e-02 -5.165164e-02
## CDJUDGE 1.620137e-02 -1.271498e-01 -2.252275e-02 -5.221839e-03
## CDCOMMUN -2.348695e-02 -1.357560e-01 -8.587576e-03 6.920052e-03
## CDHOME -5.406003e-03 -1.480558e-01 -7.071766e-02 2.289765e-02
## CDCARE -1.717863e-02 -1.912339e-01 -5.182892e-02 1.954419e-02
## CDGLOBAL -7.826934e-03 -8.746936e-02 -3.831134e-02 3.844077e-02
## PC21 PC22 PC23 PC24
## MMSCORE 5.752610e-03 -1.762204e-02 2.088240e-02 -4.652456e-03
## FAQTOTAL 1.023005e-02 -1.734626e-03 4.096015e-03 -3.227616e-03
## GDTOTAL 3.013770e-02 6.925024e-02 -2.320315e-02 3.531937e-02
## adascog -5.493715e-03 2.604053e-03 2.057082e-03 5.617345e-03
## sobcdr -2.347681e-02 3.917588e-02 -3.815348e-02 1.573966e-02
## DXCURREN -1.932078e-02 -4.660325e-02 6.527360e-02 -4.760789e-02
## DX_Conversion -9.934168e-02 3.166377e-02 1.074453e-02 -2.159813e-02
## DXCONTYP -6.636329e-01 2.501236e-01 2.517011e-02 -4.247415e-02
## DX_Confidence -6.354816e-02 8.283330e-02 3.002973e-03 -8.098337e-02
## Gender -1.619464e-01 -1.239000e-02 2.677130e-01 5.350883e-01
## Married 8.973784e-03 4.433417e-02 5.514138e-02 -6.456156e-02
## Education 1.945739e-03 -7.162676e-04 7.671872e-03 2.068332e-02
## Age 5.522626e-03 -3.949414e-03 9.906130e-03 7.136581e-03
## Weight_Kg -1.238190e-03 1.806722e-03 4.834877e-03 9.838336e-03
## VSBPSYS 3.889844e-04 8.312053e-04 -3.274669e-03 -3.965168e-04
## VSBPDIA -2.777396e-03 -2.857928e-04 3.641461e-03 -2.705948e-03
## VSPULSE 5.247397e-03 5.606177e-04 -2.322217e-03 -4.003495e-03
## VSRESP 4.540344e-03 -4.880082e-03 -1.587274e-03 3.995895e-03
## VSTEMP -5.343708e-03 -1.112970e-03 -3.251505e-03 8.966444e-03
## SymptomeSeverety 4.477019e-02 -5.090860e-02 5.393318e-01 -4.175339e-03
## SymptomeChronicity 2.683579e-02 1.336327e-01 -4.308140e-01 -3.677727e-03
## BC.USEA -4.662934e-02 -4.832607e-02 4.112072e-02 -3.421026e-02
## BCVOMIT -2.720348e-02 1.141423e-03 3.976233e-02 -1.917255e-02
## BCDIARRH -5.845566e-02 -1.436475e-01 2.919602e-02 -9.162681e-02
## BCCONSTP -8.248917e-02 -1.240284e-01 7.154449e-02 -7.075546e-02
## BCABDOMN -6.469147e-02 -1.216933e-01 6.964136e-02 -6.974023e-02
## BCSWEATN -8.736769e-02 -7.715562e-02 1.881362e-02 -4.275898e-04
## BCDIZZY -9.333220e-02 -1.314975e-01 1.545719e-01 -1.643159e-01
## BCENERGY -2.415951e-01 -3.643489e-01 1.403113e-01 -2.494647e-01
## BCDROWSY -1.279535e-01 -2.431035e-01 -5.620816e-03 -2.915594e-01
## BCVISION -3.005219e-02 -5.710773e-02 -3.338882e-02 -4.855553e-02
## BCHDACHE -1.192534e-01 -4.094781e-02 1.049145e-01 -5.934212e-03
## BCDRYMTH -9.047768e-02 -1.418006e-01 -7.780372e-03 -8.726325e-02
## BCBREATH -1.178738e-01 -1.440259e-01 4.510605e-02 -1.059161e-02
## BCCOUGH -1.383303e-01 -1.128931e-01 6.946893e-02 -6.490510e-02
## BCPALPIT -3.094394e-02 -5.737425e-02 1.402155e-03 -4.401561e-03
## BCCHEST -3.566431e-02 -3.063846e-02 1.083575e-02 -1.077695e-02
## BCURNDIS -7.683423e-03 1.889372e-03 2.961121e-03 -1.729530e-02
## BCURNFRQ -5.117061e-02 -3.012364e-01 -4.153203e-01 -2.924864e-01
## BCANKLE -8.962804e-02 -1.158949e-01 6.880593e-02 8.180049e-02
## BCMUSCLE -2.355691e-01 -4.682482e-01 -3.599386e-01 5.708683e-01
## BCRASH -4.048126e-02 -8.115753e-02 -2.650512e-02 -3.322840e-02
## BCINSOMN -2.785461e-02 -4.427041e-02 9.402560e-02 -4.078748e-02
## BCDPMOOD -9.063705e-02 -1.795428e-01 9.363073e-02 -7.125036e-02
## BCCRYING -2.465241e-02 -6.586979e-02 4.329449e-02 4.807385e-03
## BCELMOOD -1.720105e-02 -3.597675e-02 3.828379e-04 -2.166544e-02
## BCWANDER -1.460170e-04 -5.757171e-03 -6.229654e-04 -1.094610e-02
## BCFALL -8.493933e-02 -1.437508e-02 5.949110e-02 1.763137e-02
## BCOTHER -8.493933e-02 -1.437508e-02 5.949110e-02 1.763137e-02
## CTWHITE 8.502222e-03 -1.203537e-02 1.057629e-02 -8.612122e-03
## CTRED -7.353353e-05 -8.583005e-05 -4.353070e-05 5.117684e-05
## PROTEIN 4.537258e-04 1.156949e-03 1.397686e-03 3.566370e-04
## GLUCOSE -8.244361e-04 -7.428599e-05 -9.452890e-04 -1.259363e-04
## ApoEGeneAllele1 3.012229e-01 -3.511505e-01 1.629691e-01 2.079415e-01
## ApoEGeneAllele2 4.043433e-01 -2.650053e-01 2.786011e-02 -1.093289e-01
## CDMEMORY 5.307036e-25 2.613968e-25 1.563035e-24 2.711324e-24
## CDORIENT 1.418319e-02 -1.947907e-02 3.181332e-02 -1.347922e-03
## CDJUDGE 3.148343e-03 -1.857695e-02 -2.192601e-02 6.242133e-02
## CDCOMMUN 2.700327e-03 -6.638471e-03 -2.006457e-02 3.572438e-03
## CDHOME -7.854158e-03 2.760995e-02 -8.757912e-03 -8.823163e-03
## CDCARE -2.712497e-02 2.458448e-02 1.272871e-03 -2.524398e-02
## CDGLOBAL -8.529532e-03 3.167593e-02 -2.049118e-02 -1.483904e-02
## PC25 PC26 PC27 PC28
## MMSCORE -2.234757e-02 1.851419e-03 8.964926e-03 6.592447e-02
## FAQTOTAL -6.057565e-04 2.145152e-03 -6.783652e-03 3.902058e-03
## GDTOTAL -3.118905e-02 1.447153e-02 -5.536938e-03 -2.039500e-02
## adascog 4.774074e-03 4.284026e-03 -5.991638e-03 -4.775104e-03
## sobcdr 2.903316e-02 2.863223e-02 8.308363e-03 -1.382462e-01
## DXCURREN -2.687035e-01 -9.728303e-02 4.205794e-02 7.087333e-01
## DX_Conversion -1.487131e-02 2.113637e-02 3.736175e-03 -1.175549e-02
## DXCONTYP -8.510307e-02 1.217603e-01 -1.834850e-03 -1.619959e-01
## DX_Confidence -1.372586e-01 3.659019e-02 8.588377e-02 1.183778e-01
## Gender 4.738586e-01 1.394011e-01 -3.828968e-01 1.886680e-01
## Married -1.518560e-02 7.867901e-02 6.139237e-02 9.897259e-02
## Education 4.336931e-03 2.112515e-03 -1.201962e-02 3.173045e-03
## Age 5.478366e-03 -3.907809e-04 4.890652e-04 5.707065e-03
## Weight_Kg 7.563456e-03 -5.104984e-04 -6.185859e-03 5.659309e-03
## VSBPSYS -2.236672e-04 -5.267196e-04 5.025500e-04 3.834196e-04
## VSBPDIA 1.407483e-03 -2.091439e-03 -5.448809e-04 1.171646e-04
## VSPULSE -6.356957e-03 4.456029e-04 3.343011e-03 1.467384e-03
## VSRESP -4.689916e-03 2.746889e-03 -5.715333e-03 -2.938163e-03
## VSTEMP 2.154892e-03 -1.491276e-02 -6.158853e-03 2.510345e-04
## SymptomeSeverety -4.226648e-01 -1.946510e-02 -1.318369e-01 -1.586429e-01
## SymptomeChronicity 3.572609e-01 1.601732e-02 1.278447e-01 1.290425e-01
## BC.USEA 3.414855e-02 2.591580e-02 -3.009166e-02 -5.240366e-02
## BCVOMIT 1.093993e-02 1.059684e-02 -1.152880e-02 -3.881578e-02
## BCDIARRH -2.966896e-02 5.033310e-02 -6.682021e-02 -3.052411e-02
## BCCONSTP -7.662069e-02 4.218646e-03 -1.771468e-01 4.393484e-02
## BCABDOMN -3.041555e-03 7.184278e-02 -4.686699e-04 -7.923784e-02
## BCSWEATN 6.253688e-02 3.515274e-02 5.681317e-03 -1.791013e-02
## BCDIZZY 6.788494e-02 2.172528e-01 -5.603197e-02 -1.518540e-01
## BCENERGY 2.589651e-01 -2.684142e-01 3.064640e-01 -5.527853e-02
## BCDROWSY 1.255272e-01 -1.958614e-02 2.148962e-01 5.737666e-03
## BCVISION -4.798620e-02 2.366793e-02 6.975356e-02 1.565037e-02
## BCHDACHE -1.060297e-02 1.254325e-01 -2.009920e-03 1.104160e-01
## BCDRYMTH 1.215251e-01 6.684799e-02 -7.719310e-02 9.828152e-04
## BCBREATH 1.033790e-01 -2.430303e-02 -1.474380e-02 -3.274963e-02
## BCCOUGH 5.685595e-02 -1.362960e-01 -3.922493e-02 7.710648e-02
## BCPALPIT 1.028723e-02 5.525939e-02 -3.780090e-02 -2.427441e-02
## BCCHEST 2.857685e-02 1.157680e-02 -1.511904e-02 -3.043525e-03
## BCURNDIS 1.133247e-02 7.211001e-03 -1.113146e-02 -2.127954e-02
## BCURNFRQ -1.645306e-01 4.354859e-01 -4.944383e-01 9.611239e-02
## BCANKLE 7.977998e-02 4.595911e-02 -8.677213e-02 6.935153e-02
## BCMUSCLE -3.383663e-01 -2.542034e-01 9.032158e-02 -1.370955e-01
## BCRASH -3.533943e-02 3.708682e-02 -2.959590e-02 -5.314188e-03
## BCINSOMN 1.115265e-01 -9.818405e-02 -1.172965e-01 9.757000e-02
## BCDPMOOD 1.700479e-01 -1.350485e-01 -1.305598e-03 2.725326e-01
## BCCRYING 5.848197e-02 -3.816167e-03 -3.505139e-03 7.660657e-02
## BCELMOOD 5.643805e-03 -5.875142e-03 2.746686e-02 -2.637468e-02
## BCWANDER 4.048761e-03 -1.920708e-02 -1.882095e-03 1.386417e-02
## BCFALL -4.635409e-02 1.362427e-02 -6.357533e-02 -3.897302e-03
## BCOTHER -4.635409e-02 1.362427e-02 -6.357533e-02 -3.897302e-03
## CTWHITE -1.017384e-02 4.432921e-03 -5.814425e-03 -1.042503e-02
## CTRED -4.364994e-05 -1.923364e-05 4.423911e-05 1.619087e-05
## PROTEIN 1.724187e-03 7.292531e-04 -1.113852e-03 3.211017e-04
## GLUCOSE -1.910573e-04 -1.196755e-04 9.571174e-04 -6.345274e-04
## ApoEGeneAllele1 4.065678e-02 5.851440e-01 4.279143e-01 8.365059e-03
## ApoEGeneAllele2 1.272402e-01 -3.589541e-01 -3.642218e-01 -1.922388e-01
## CDMEMORY 2.694350e-24 1.731909e-24 7.832366e-24 8.142559e-25
## CDORIENT -9.781767e-02 -9.700808e-02 3.887033e-02 2.370054e-01
## CDJUDGE -2.196705e-04 4.069292e-02 2.254181e-02 -1.625404e-02
## CDCOMMUN -1.068840e-02 -3.971025e-03 -7.999696e-02 6.067480e-02
## CDHOME -6.245072e-03 6.235157e-02 4.113790e-02 -9.598129e-02
## CDCARE 6.685728e-02 3.370654e-02 2.466222e-02 -1.204852e-01
## CDGLOBAL 7.714670e-02 -7.139699e-03 -3.890693e-02 -2.032059e-01
## PC29 PC30 PC31 PC32
## MMSCORE -1.872007e-02 -1.226507e-02 5.371403e-03 6.806226e-03
## FAQTOTAL -3.114183e-03 1.857668e-03 -2.618398e-03 -8.205194e-04
## GDTOTAL 1.537281e-02 -5.421128e-03 -4.971918e-03 -1.443894e-02
## adascog -2.333168e-03 3.943494e-03 1.162428e-03 -4.646197e-03
## sobcdr 5.198158e-02 1.399080e-02 1.328256e-02 -8.319240e-04
## DXCURREN -1.230665e-01 -1.301482e-01 -4.215764e-02 9.182903e-02
## DX_Conversion 2.041716e-03 -3.867248e-02 -1.944983e-02 -9.195802e-03
## DXCONTYP 8.559909e-02 -2.039279e-02 1.758731e-04 -1.141321e-01
## DX_Confidence -2.430534e-02 -3.165055e-02 -1.459416e-02 2.480811e-02
## Gender -1.350675e-01 -1.951125e-01 4.913415e-02 -1.720335e-01
## Married -9.346096e-02 2.202879e-02 1.169202e-01 4.949474e-03
## Education -5.728542e-03 -2.501626e-03 8.585686e-04 2.440692e-04
## Age -9.436791e-04 -1.153165e-03 1.650132e-03 -5.779170e-04
## Weight_Kg -4.174100e-03 -2.429870e-03 3.473888e-04 -4.747615e-03
## VSBPSYS -3.914850e-04 6.007565e-04 -4.629420e-04 8.274229e-04
## VSBPDIA 9.431385e-04 -1.601107e-03 9.104095e-05 1.094198e-03
## VSPULSE -8.517060e-04 3.103708e-03 1.187739e-03 1.504271e-03
## VSRESP -5.287476e-03 1.230189e-04 -2.216313e-03 2.914294e-04
## VSTEMP -3.272013e-03 3.704575e-03 5.109072e-04 2.140490e-04
## SymptomeSeverety 3.535776e-02 -1.099853e-01 6.291900e-02 -1.347632e-01
## SymptomeChronicity -3.489009e-02 7.425161e-02 -4.704250e-02 1.104044e-01
## BC.USEA -5.628146e-02 5.315772e-02 1.251125e-02 1.121345e-01
## BCVOMIT 1.971138e-02 -5.987894e-03 1.600716e-02 4.964494e-02
## BCDIARRH 2.989662e-01 -1.027560e-01 2.229774e-01 3.247287e-01
## BCCONSTP -4.167790e-02 3.499026e-01 -2.431882e-01 -2.762189e-01
## BCABDOMN -4.729923e-03 -5.248244e-02 1.012070e-01 1.133990e-01
## BCSWEATN -5.721224e-02 -2.531790e-02 -2.243708e-02 4.615493e-02
## BCDIZZY -5.101039e-01 2.678560e-01 -3.422936e-01 3.834708e-01
## BCENERGY -1.023576e-02 -4.326369e-02 2.076542e-02 -3.003189e-01
## BCDROWSY -1.884557e-01 -2.807051e-01 1.760558e-01 -1.450411e-01
## BCVISION -1.049529e-01 4.341230e-02 5.522880e-02 -2.240109e-02
## BCHDACHE -2.543588e-01 1.506597e-01 -1.384464e-01 -3.769728e-02
## BCDRYMTH -1.243110e-02 -2.973303e-01 -8.409563e-02 2.317447e-01
## BCBREATH 8.478804e-02 -1.654340e-01 4.647341e-02 1.958669e-01
## BCCOUGH 3.717646e-01 -1.680153e-01 -6.004739e-01 2.457969e-01
## BCPALPIT -2.795860e-02 -6.389679e-04 3.002885e-02 4.666802e-02
## BCCHEST 5.615744e-03 4.354827e-02 3.636547e-02 3.749955e-02
## BCURNDIS -8.883273e-03 -1.024032e-02 -1.974779e-02 -2.121747e-02
## BCURNFRQ 8.566011e-02 -6.112535e-02 4.192447e-02 -2.484706e-01
## BCANKLE 1.416736e-01 -9.475448e-02 1.408752e-01 1.083461e-01
## BCMUSCLE -9.361066e-02 7.831173e-02 -4.318991e-02 3.550406e-02
## BCRASH 6.536742e-02 2.483969e-02 1.467765e-01 1.424908e-01
## BCINSOMN 4.584748e-01 3.717169e-01 -1.492251e-01 -4.940208e-02
## BCDPMOOD 7.686329e-02 4.526520e-01 2.683826e-01 -4.097431e-02
## BCCRYING 4.283903e-03 1.163116e-01 1.332699e-01 6.608381e-02
## BCELMOOD 2.050337e-03 6.272190e-03 1.380323e-03 2.123385e-02
## BCWANDER -4.622507e-03 -6.960809e-03 5.457730e-03 -7.052131e-03
## BCFALL -9.048249e-04 1.748853e-01 2.603476e-01 2.953241e-01
## BCOTHER -9.048249e-04 1.748853e-01 2.603476e-01 2.953241e-01
## CTWHITE -1.985819e-03 6.019254e-03 2.278714e-03 1.118449e-04
## CTRED 1.227433e-05 -2.058913e-05 -1.273270e-05 1.785075e-05
## PROTEIN -6.444586e-04 -9.031068e-04 -5.975859e-04 2.231573e-04
## GLUCOSE 5.380687e-04 8.703670e-04 4.410236e-04 9.686955e-05
## ApoEGeneAllele1 2.084022e-01 5.340837e-02 -7.557829e-02 -4.532903e-02
## ApoEGeneAllele2 -1.277900e-01 -5.350859e-02 5.863380e-03 1.725632e-02
## CDMEMORY -2.117582e-22 1.694066e-21 1.734723e-18 -3.469447e-18
## CDORIENT -2.889238e-02 -7.907325e-02 -5.579701e-02 3.658310e-02
## CDJUDGE -3.421433e-02 -4.971482e-02 -5.140974e-02 -3.430699e-02
## CDCOMMUN -3.421977e-02 -2.076527e-02 3.201039e-02 6.419670e-02
## CDHOME 2.427385e-02 6.233397e-02 3.620298e-02 -2.300392e-02
## CDCARE 5.274921e-02 4.482068e-02 7.091394e-02 -1.469466e-02
## CDGLOBAL 7.228502e-02 5.638949e-02 -1.863800e-02 -2.960616e-02
## PC33 PC34 PC35 PC36
## MMSCORE 8.808236e-03 2.159396e-02 1.602235e-02 5.704420e-03
## FAQTOTAL 6.766126e-04 4.557567e-03 -8.810180e-03 -2.434050e-03
## GDTOTAL -3.259497e-03 4.332955e-03 -9.560312e-03 -7.047022e-03
## adascog -9.294980e-04 -2.919341e-04 1.629406e-03 4.643297e-03
## sobcdr 1.016993e-02 -2.466438e-02 6.415839e-03 -3.834185e-03
## DXCURREN 1.429472e-03 9.027435e-02 1.073908e-01 -2.354550e-02
## DX_Conversion -9.809028e-03 4.798959e-03 1.152357e-02 -2.793114e-03
## DXCONTYP -2.029202e-02 4.146618e-02 3.603971e-02 5.507368e-02
## DX_Confidence 1.019791e-02 4.363846e-02 4.769264e-02 1.391665e-02
## Gender 5.380246e-02 3.956928e-02 1.139032e-01 -8.858408e-02
## Married 1.388222e-01 2.596774e-02 -3.068759e-01 -4.697176e-01
## Education -4.607480e-03 -3.824984e-03 5.667823e-03 -1.069468e-03
## Age -5.101615e-04 9.340293e-04 -1.564540e-04 -3.596748e-03
## Weight_Kg 2.855812e-03 3.811461e-04 2.516668e-03 -1.617448e-03
## VSBPSYS 5.903469e-04 -4.411671e-04 -1.268119e-03 2.278280e-04
## VSBPDIA -9.076573e-04 9.396321e-04 1.006868e-03 7.058571e-04
## VSPULSE -6.156896e-04 2.526217e-04 -6.122908e-04 -2.728464e-04
## VSRESP 1.335060e-03 9.701172e-04 4.154582e-03 -5.194140e-03
## VSTEMP -1.114437e-02 -9.786127e-03 1.026401e-04 -8.694763e-03
## SymptomeSeverety 6.401451e-02 -2.214245e-02 -2.901700e-02 1.223294e-01
## SymptomeChronicity -4.985015e-02 1.137516e-02 3.465288e-02 -9.839693e-02
## BC.USEA -1.365301e-02 6.770007e-02 2.793424e-02 -3.807074e-02
## BCVOMIT 3.684339e-02 -3.500748e-03 4.224688e-02 -3.064192e-02
## BCDIARRH 4.394441e-02 3.757923e-01 3.239372e-01 -2.755730e-01
## BCCONSTP -2.512298e-01 -1.075366e-01 3.656585e-01 -5.036689e-01
## BCABDOMN -3.026251e-01 4.302533e-02 1.240698e-01 -1.004220e-01
## BCSWEATN -4.313369e-02 -3.960850e-02 -6.742980e-02 4.420950e-02
## BCDIZZY 1.573708e-01 2.483126e-01 1.447008e-01 1.827191e-01
## BCENERGY 4.258518e-01 6.901339e-02 -1.200425e-01 -1.557347e-01
## BCDROWSY -4.559712e-01 2.039530e-03 4.429732e-02 6.299615e-03
## BCVISION -1.806151e-01 -5.216738e-02 1.005152e-01 9.565872e-02
## BCHDACHE -3.034213e-01 -1.308961e-01 -5.279840e-01 -3.094993e-02
## BCDRYMTH 1.453694e-01 8.373751e-02 -1.534168e-01 6.597784e-03
## BCBREATH -1.768394e-01 -6.601260e-02 -3.405531e-02 1.454798e-01
## BCCOUGH 1.750393e-02 -4.451622e-01 2.415291e-02 -3.156473e-02
## BCPALPIT -6.780997e-02 3.160113e-02 -1.080037e-02 1.995523e-02
## BCCHEST -5.510926e-02 4.172447e-02 3.838289e-02 2.772767e-02
## BCURNDIS -1.267968e-02 -2.991870e-02 2.834875e-02 4.795252e-03
## BCURNFRQ 1.967703e-01 -5.647172e-02 -9.616609e-02 9.259047e-02
## BCANKLE -2.089084e-01 -3.291338e-02 -1.420191e-01 1.431669e-01
## BCMUSCLE -4.540645e-03 9.020329e-02 -4.027444e-02 1.479708e-03
## BCRASH -1.153679e-01 -1.892826e-01 7.830389e-02 -4.374102e-02
## BCINSOMN -2.244324e-01 5.274766e-01 -3.213990e-01 7.623211e-02
## BCDPMOOD 1.576069e-01 -2.391225e-01 1.982489e-01 3.920267e-01
## BCCRYING -3.171328e-02 -7.730670e-02 1.854918e-02 8.781784e-02
## BCELMOOD 1.435237e-02 1.521354e-02 4.762103e-03 -1.980826e-02
## BCWANDER -1.516168e-03 -6.478792e-03 -1.749964e-03 7.395989e-03
## BCFALL 7.790727e-02 -2.153558e-01 -1.603481e-01 -2.088557e-01
## BCOTHER 7.790727e-02 -2.153558e-01 -1.603481e-01 -2.088557e-01
## CTWHITE -5.889820e-03 1.706351e-03 -9.093301e-03 7.372684e-04
## CTRED -3.132090e-06 1.733912e-05 -5.159380e-05 2.177018e-05
## PROTEIN -9.461185e-04 -2.226209e-04 1.206483e-03 -1.388241e-03
## GLUCOSE 1.020951e-03 3.211515e-05 -1.209250e-03 9.408633e-04
## ApoEGeneAllele1 1.329605e-02 -5.190495e-02 1.330311e-02 -2.846242e-02
## ApoEGeneAllele2 -1.018975e-01 -2.245724e-02 -4.996371e-02 -3.534202e-02
## CDMEMORY 2.775558e-17 -1.387779e-17 -2.775558e-17 -2.220446e-16
## CDORIENT 2.541407e-02 8.808116e-02 -1.461001e-02 -3.412252e-02
## CDJUDGE 3.543222e-02 2.128590e-02 5.047489e-02 2.145059e-02
## CDCOMMUN 1.901284e-02 9.305177e-02 -1.274642e-01 6.788814e-03
## CDHOME -1.890533e-02 -4.335875e-02 3.146996e-02 4.628223e-02
## CDCARE -1.037302e-01 -5.737387e-02 7.514398e-02 6.411274e-02
## CDGLOBAL 5.294637e-02 -1.263506e-01 -8.598739e-03 -1.083460e-01
## PC37 PC38 PC39 PC40
## MMSCORE 1.371242e-02 -5.657822e-03 -4.544168e-03 -7.356917e-03
## FAQTOTAL 1.078763e-02 -2.559659e-03 -3.282891e-03 -5.844715e-04
## GDTOTAL -4.537897e-03 -5.425564e-03 4.357979e-03 -1.432960e-02
## adascog 1.613084e-03 1.287580e-03 3.321860e-03 -1.011802e-03
## sobcdr -6.915080e-02 2.854091e-02 -3.000018e-02 -2.309967e-03
## DXCURREN 1.578437e-01 -2.396889e-02 6.899103e-02 6.575360e-02
## DX_Conversion -1.644043e-02 3.887599e-02 -2.515326e-02 2.798968e-02
## DXCONTYP -7.775148e-02 3.544601e-02 -5.488871e-02 8.917067e-03
## DX_Confidence 3.581154e-02 3.798808e-02 -1.479934e-02 -2.322732e-02
## Gender 9.407875e-03 3.972002e-02 1.715142e-01 -1.086286e-01
## Married -6.035163e-01 2.091203e-01 -1.519174e-01 -1.756089e-01
## Education -5.360053e-03 -6.294379e-03 3.950610e-04 1.439188e-03
## Age -2.884677e-03 -5.057130e-03 1.405044e-03 1.448276e-03
## Weight_Kg -4.108107e-04 -2.242862e-04 2.792300e-03 -2.020012e-03
## VSBPSYS -1.208951e-03 -5.345304e-04 1.266524e-03 -1.684671e-03
## VSBPDIA 8.920790e-04 -1.680317e-03 -1.250732e-03 2.078397e-03
## VSPULSE -2.886556e-04 4.530826e-04 1.612551e-04 9.493999e-04
## VSRESP 2.034321e-03 1.963695e-03 -8.728249e-04 1.544363e-03
## VSTEMP -3.509305e-03 2.400895e-03 -1.521546e-02 1.383602e-02
## SymptomeSeverety -4.701515e-02 2.202449e-02 2.533671e-02 2.066525e-02
## SymptomeChronicity 4.664984e-02 -2.144433e-02 -2.863984e-02 -1.234476e-02
## BC.USEA 2.131140e-02 -5.739480e-02 6.886549e-02 2.925713e-02
## BCVOMIT -1.801292e-02 -3.876340e-02 9.093139e-02 5.215899e-02
## BCDIARRH -2.253490e-01 -3.187171e-01 2.575716e-01 1.522584e-02
## BCCONSTP 8.309930e-02 1.832438e-02 -2.539183e-01 2.908430e-01
## BCABDOMN 1.944078e-01 1.164508e-01 -2.618641e-01 -3.494849e-01
## BCSWEATN 4.745891e-02 -4.508264e-02 1.590590e-01 1.209203e-01
## BCDIZZY -2.908069e-02 7.113693e-02 1.264500e-02 -1.104799e-01
## BCENERGY 2.838189e-01 -1.709567e-01 -4.416946e-02 -1.235557e-01
## BCDROWSY -1.566367e-01 2.536184e-01 2.818105e-01 6.523152e-02
## BCVISION -2.942415e-02 2.500804e-01 1.571465e-01 -1.505475e-01
## BCHDACHE -8.508308e-02 -4.832582e-01 1.473040e-01 2.373315e-02
## BCDRYMTH -2.169277e-02 6.882307e-02 -3.010153e-01 5.808597e-01
## BCBREATH 1.531557e-02 9.249104e-02 -2.160945e-01 -6.910771e-02
## BCCOUGH -1.482330e-01 7.088487e-02 1.819482e-01 -1.718431e-01
## BCPALPIT 1.502052e-02 -8.523131e-02 -1.072871e-01 -5.435377e-02
## BCCHEST -1.352359e-02 -1.882477e-02 -2.934121e-02 -1.265079e-02
## BCURNDIS -2.334351e-02 -3.990573e-02 7.247742e-02 2.874452e-02
## BCURNFRQ 6.239898e-02 4.049653e-02 8.818349e-02 -1.271105e-01
## BCANKLE 7.199720e-02 -2.164248e-02 -3.974064e-01 8.245263e-02
## BCMUSCLE -1.047176e-01 4.466900e-02 4.387986e-02 2.899454e-02
## BCRASH -7.436229e-02 -4.806384e-01 -1.461211e-01 -1.637425e-01
## BCINSOMN 7.260154e-02 1.634231e-01 8.259077e-02 -6.864748e-02
## BCDPMOOD -3.549499e-01 3.445600e-02 -1.020548e-01 7.135339e-02
## BCCRYING -4.047422e-02 -5.325776e-03 6.366329e-02 7.474038e-02
## BCELMOOD -6.963165e-03 -2.406184e-02 4.000611e-02 4.027910e-02
## BCWANDER -1.431772e-02 -5.509442e-03 1.144899e-02 -1.884361e-02
## BCFALL 2.839766e-01 1.805568e-01 1.183349e-01 -1.601622e-02
## BCOTHER 2.839766e-01 1.805568e-01 1.183349e-01 -1.601622e-02
## CTWHITE -1.141425e-02 9.057251e-03 -1.151750e-02 6.975274e-03
## CTRED -6.474215e-06 1.189665e-05 -1.667807e-05 4.821989e-07
## PROTEIN 4.810350e-04 -9.763268e-04 1.501116e-03 -8.948250e-04
## GLUCOSE -4.029234e-04 4.162311e-04 -9.442471e-04 4.060640e-04
## ApoEGeneAllele1 2.328733e-02 5.988111e-02 3.867066e-03 6.455678e-02
## ApoEGeneAllele2 -5.646420e-02 -1.291881e-02 1.765253e-04 -3.244155e-02
## CDMEMORY 0.000000e+00 5.551115e-17 -1.665335e-16 1.110223e-16
## CDORIENT 4.111030e-02 8.929512e-02 -5.657061e-02 -1.193477e-01
## CDJUDGE -2.786064e-02 -7.705708e-02 -2.807609e-01 -3.775553e-01
## CDCOMMUN -1.270163e-01 3.780603e-02 -5.067338e-02 1.545105e-01
## CDHOME 1.203618e-02 -3.123814e-02 3.679632e-02 7.828844e-02
## CDCARE 1.008030e-01 -1.600977e-01 2.098601e-01 1.304565e-01
## CDGLOBAL -6.822336e-02 1.698327e-01 1.113484e-01 1.313376e-01
## PC41 PC42 PC43 PC44
## MMSCORE -1.984765e-03 -1.306404e-02 -4.865200e-03 1.231480e-02
## FAQTOTAL -3.347025e-03 4.788102e-03 1.000333e-03 1.794265e-03
## GDTOTAL 5.933514e-03 -9.426794e-04 -9.171325e-03 5.224730e-03
## adascog 1.573111e-03 -1.105002e-03 -8.935914e-04 -9.228921e-05
## sobcdr -7.243072e-03 -4.376044e-02 -3.093439e-02 2.935289e-02
## DXCURREN 7.623378e-03 9.989474e-02 1.561534e-01 3.925511e-03
## DX_Conversion 3.991401e-02 -2.167504e-02 -1.702582e-02 3.649488e-03
## DXCONTYP 4.025175e-02 -7.553025e-03 8.992536e-04 -3.418109e-02
## DX_Confidence 8.000081e-04 1.317389e-02 -5.005859e-04 -3.379495e-03
## Gender 9.554221e-02 2.266791e-02 -8.085532e-03 -3.611217e-02
## Married 4.438883e-02 2.321277e-01 1.951622e-01 -3.528862e-02
## Education 2.137579e-03 3.133193e-03 -5.481539e-03 1.430244e-03
## Age 3.060853e-03 -2.675924e-03 4.070352e-04 2.025547e-03
## Weight_Kg 2.367504e-03 -2.593533e-03 -2.359019e-04 8.805119e-04
## VSBPSYS 5.053195e-04 -4.002247e-04 -2.949729e-04 -2.901274e-04
## VSBPDIA -5.676588e-04 1.408495e-04 -1.060950e-04 5.481495e-04
## VSPULSE -9.178723e-04 -6.716331e-04 1.111162e-03 6.170797e-04
## VSRESP -3.762696e-03 7.551544e-04 4.324509e-03 2.617591e-03
## VSTEMP -1.104812e-02 -3.004810e-03 2.119414e-03 -1.520554e-02
## SymptomeSeverety 3.035203e-02 8.956349e-03 -2.414259e-02 1.598102e-02
## SymptomeChronicity -3.126128e-02 -7.363835e-03 1.835957e-02 -1.198472e-02
## BC.USEA 6.789745e-03 -1.422873e-02 6.205680e-02 -5.423045e-02
## BCVOMIT 1.110308e-02 2.983398e-03 3.361810e-03 -6.701699e-02
## BCDIARRH -2.651125e-01 -1.425975e-01 -4.506193e-02 1.086168e-01
## BCCONSTP -9.623929e-02 6.942362e-02 -1.362464e-01 1.569910e-03
## BCABDOMN 1.956071e-01 -3.606975e-01 5.006782e-01 2.134129e-01
## BCSWEATN -6.382500e-02 2.966046e-01 2.155591e-01 4.961255e-01
## BCDIZZY -2.530829e-02 9.681602e-02 2.112995e-02 -1.665205e-01
## BCENERGY -6.047786e-02 3.337328e-02 6.647652e-02 -8.957468e-02
## BCDROWSY 1.002543e-01 -1.010389e-01 -2.452804e-01 -1.365470e-01
## BCVISION 4.181086e-02 1.437831e-01 -3.906583e-03 2.397932e-03
## BCHDACHE -1.643727e-01 -2.274963e-01 -1.840224e-02 1.729770e-01
## BCDRYMTH 3.901608e-01 -1.108561e-01 -9.225968e-02 2.198282e-01
## BCBREATH -3.844264e-01 4.925467e-01 -2.309959e-01 1.736524e-01
## BCCOUGH 2.878405e-02 -1.202146e-01 5.012291e-02 -1.075849e-01
## BCPALPIT -3.026622e-02 -5.087240e-02 -5.618458e-03 3.312808e-02
## BCCHEST -1.766127e-02 -2.808835e-02 -1.523482e-03 3.280704e-02
## BCURNDIS -3.322744e-02 -3.468216e-02 -2.945895e-02 -1.925420e-02
## BCURNFRQ -3.092377e-02 2.688088e-02 2.727894e-02 -3.967389e-03
## BCANKLE -3.575984e-01 1.132195e-02 2.421381e-01 -3.832893e-01
## BCMUSCLE 4.713502e-02 -6.875501e-03 4.804528e-02 -2.189699e-02
## BCRASH 5.255059e-01 3.549351e-01 -9.520846e-02 -2.025513e-01
## BCINSOMN 2.206740e-01 1.051079e-01 -8.690673e-02 6.351657e-03
## BCDPMOOD -3.969583e-03 -1.734807e-01 2.018926e-02 1.349863e-01
## BCCRYING 1.248904e-01 -2.782771e-02 3.170567e-02 9.956664e-02
## BCELMOOD 3.027048e-02 3.878208e-02 3.348578e-03 2.150567e-02
## BCWANDER -7.072980e-03 -2.031991e-02 -2.426457e-02 1.084809e-02
## BCFALL 1.529845e-02 -5.314169e-02 -1.708983e-01 -2.800417e-02
## BCOTHER 1.529845e-02 -5.314169e-02 -1.708983e-01 -2.800417e-02
## CTWHITE -4.741662e-03 -3.499536e-03 -9.718629e-03 1.229494e-03
## CTRED 1.814775e-05 1.175100e-05 3.949060e-05 -2.739135e-05
## PROTEIN 5.159421e-04 -6.052100e-05 5.798187e-04 -1.372805e-03
## GLUCOSE 2.164272e-04 4.273242e-04 -5.680503e-04 4.397305e-04
## ApoEGeneAllele1 1.097070e-02 -2.444823e-03 -3.394181e-02 -3.670230e-02
## ApoEGeneAllele2 2.195009e-02 1.383602e-02 4.241021e-02 -1.264398e-02
## CDMEMORY -2.081668e-16 -8.326673e-17 1.110223e-16 4.857226e-17
## CDORIENT 2.284601e-02 7.510126e-02 -6.665085e-02 1.011920e-01
## CDJUDGE 9.342782e-03 -1.901213e-01 -4.687612e-01 2.705046e-01
## CDCOMMUN -9.938289e-02 -2.424404e-01 -7.205893e-02 -3.765136e-01
## CDHOME 6.960302e-02 1.004726e-01 2.004045e-01 -3.115940e-02
## CDCARE 1.095704e-01 1.846995e-01 1.678233e-01 -1.378719e-01
## CDGLOBAL -1.192224e-01 2.852791e-02 2.083087e-01 2.032012e-01
## PC45 PC46 PC47 PC48
## MMSCORE 4.886770e-03 4.213027e-03 2.000304e-03 3.185048e-03
## FAQTOTAL 5.940551e-03 4.208301e-03 7.007631e-04 -2.233709e-03
## GDTOTAL 3.163269e-03 -5.418544e-03 -7.717967e-03 1.390531e-02
## adascog -2.080325e-03 1.999294e-03 2.615444e-03 6.278129e-04
## sobcdr 2.897767e-02 1.299065e-02 1.777348e-02 -1.607390e-02
## DXCURREN 1.008771e-01 -6.119192e-02 -1.652097e-01 -6.853794e-02
## DX_Conversion 2.707762e-03 -1.494788e-02 -1.127772e-02 1.102258e-02
## DXCONTYP 1.511102e-02 6.837877e-03 1.444093e-02 -1.137230e-03
## DX_Confidence 2.585042e-02 -4.213196e-03 -2.948803e-03 -5.109362e-02
## Gender -1.272437e-02 1.542482e-02 -1.972990e-02 -3.958311e-02
## Married -1.394216e-01 -2.463115e-02 -3.681952e-02 8.315697e-02
## Education -2.306534e-03 7.381081e-04 5.077597e-03 -7.353921e-03
## Age -3.548837e-04 -1.851647e-03 4.559597e-03 1.238042e-03
## Weight_Kg -1.533574e-03 1.012383e-03 5.208754e-04 7.712490e-04
## VSBPSYS -8.412924e-04 -5.800642e-04 4.393836e-05 -4.707291e-06
## VSBPDIA 9.148311e-04 8.607358e-04 -8.821550e-05 1.734997e-03
## VSPULSE 1.957353e-04 -1.184126e-04 1.553619e-03 -3.840255e-04
## VSRESP 4.559923e-04 -2.161758e-03 2.090245e-03 2.132151e-03
## VSTEMP 1.854611e-03 -1.396829e-03 2.546913e-03 1.006801e-02
## SymptomeSeverety 2.745419e-03 -1.368741e-02 5.452984e-03 -2.909698e-03
## SymptomeChronicity -3.360335e-03 7.528496e-03 1.573740e-04 1.128149e-03
## BC.USEA -2.305493e-02 1.438296e-02 -1.902931e-04 1.006371e-01
## BCVOMIT 4.045910e-02 4.259477e-02 -4.004316e-02 4.498184e-02
## BCDIARRH -4.061838e-03 1.220128e-01 -2.565690e-02 5.447243e-02
## BCCONSTP -4.345632e-02 1.734702e-02 7.242915e-02 2.741498e-02
## BCABDOMN -1.142913e-01 -3.036317e-02 7.128073e-02 -2.148162e-01
## BCSWEATN 1.547768e-01 -1.605986e-01 5.926166e-01 2.987235e-01
## BCDIZZY 7.415162e-02 -1.024861e-01 -6.855971e-02 2.832349e-02
## BCENERGY 1.914272e-02 1.064180e-01 3.125571e-02 -5.847280e-02
## BCDROWSY 7.361927e-02 -2.953620e-01 -5.876236e-02 1.144290e-01
## BCVISION 1.026579e-01 8.547594e-01 9.153196e-02 4.514432e-02
## BCHDACHE -4.226130e-02 1.499801e-01 -1.286791e-01 -8.295043e-02
## BCDRYMTH -7.331617e-02 2.236545e-01 -1.143161e-01 2.946273e-02
## BCBREATH -2.508173e-01 -3.384613e-02 -6.169066e-02 -4.158909e-01
## BCCOUGH -6.465036e-02 -1.402755e-02 4.881276e-02 6.707424e-02
## BCPALPIT -1.099761e-01 -6.833845e-02 -7.578448e-02 -1.158789e-01
## BCCHEST -2.531576e-02 1.216566e-02 1.280439e-02 -1.628049e-02
## BCURNDIS -6.296673e-02 1.117603e-01 -6.662022e-02 -7.619726e-02
## BCURNFRQ -3.164455e-02 -3.389200e-02 -2.026317e-02 -7.337439e-03
## BCANKLE 2.667814e-01 5.029736e-02 -8.811741e-02 4.344930e-01
## BCMUSCLE -3.131312e-02 -4.842451e-02 -5.725509e-02 -3.771924e-03
## BCRASH 3.022310e-01 -2.783231e-02 7.262511e-02 -1.233105e-01
## BCINSOMN 5.046631e-02 -3.611357e-02 -3.345583e-02 4.300550e-03
## BCDPMOOD -8.387079e-02 -2.883639e-02 -1.898352e-02 7.778427e-03
## BCCRYING 7.756795e-02 -4.914306e-02 2.886290e-02 -1.152679e-01
## BCELMOOD 7.050980e-02 -1.566027e-02 3.794343e-02 4.682030e-02
## BCWANDER 7.355486e-03 1.862024e-02 3.203864e-03 1.434734e-02
## BCFALL -2.572759e-02 -3.068196e-02 -2.115801e-03 6.378351e-02
## BCOTHER -2.572759e-02 -3.068196e-02 -2.115801e-03 6.378351e-02
## CTWHITE 5.122042e-03 -1.836579e-03 -1.192626e-03 1.374152e-03
## CTRED -5.359986e-06 5.704590e-06 -2.307602e-05 -1.889938e-05
## PROTEIN -1.756584e-04 2.123899e-04 2.276819e-04 -9.247341e-04
## GLUCOSE -1.827021e-05 -3.581994e-04 2.672075e-04 3.663294e-04
## ApoEGeneAllele1 1.900150e-02 -4.256982e-03 2.314995e-02 -5.193865e-02
## ApoEGeneAllele2 -2.078270e-02 3.810731e-02 -1.879057e-02 5.451987e-02
## CDMEMORY -2.775558e-17 0.000000e+00 -5.551115e-17 5.551115e-17
## CDORIENT -4.144077e-02 3.958522e-02 2.604101e-02 7.487668e-02
## CDJUDGE 1.137440e-01 -1.221281e-02 -4.011938e-02 3.046938e-01
## CDCOMMUN 4.529431e-02 2.904340e-02 6.049432e-01 -3.800389e-01
## CDHOME -3.254995e-01 -1.070074e-02 -6.409283e-02 2.154911e-01
## CDCARE -3.696850e-01 9.636390e-03 -1.559954e-01 5.545375e-02
## CDGLOBAL 6.065647e-01 -4.236081e-02 -3.530031e-01 -2.865503e-01
## PC49 PC50 PC51 PC52
## MMSCORE 1.385553e-03 1.197553e-02 6.471682e-03 -1.805039e-03
## FAQTOTAL 8.534602e-04 -5.328235e-03 -3.852183e-03 5.946873e-04
## GDTOTAL 4.829487e-03 -4.546533e-03 -2.960078e-03 -7.022487e-03
## adascog 8.777444e-04 -1.237571e-03 7.154217e-04 -7.278418e-04
## sobcdr -3.309497e-02 -1.314172e-02 -4.531816e-02 4.354622e-03
## DXCURREN 7.699822e-02 1.165184e-01 2.752174e-01 -5.450960e-03
## DX_Conversion -2.136386e-02 -1.366441e-02 -2.144152e-02 7.910993e-03
## DXCONTYP -3.038503e-03 1.657515e-02 -2.429697e-02 -1.393003e-02
## DX_Confidence 1.914123e-02 -8.755584e-03 -1.318005e-02 -7.098697e-03
## Gender -5.027118e-02 -4.252476e-02 1.734344e-02 1.652539e-02
## Married 1.316659e-01 6.209275e-02 4.060147e-02 -3.500871e-02
## Education -5.525859e-03 3.203887e-04 4.253406e-04 1.645023e-03
## Age -1.631636e-03 1.789123e-03 1.476115e-03 -1.809207e-04
## Weight_Kg -7.197816e-04 -9.706148e-04 1.958495e-04 -6.000605e-04
## VSBPSYS 1.965988e-04 4.561620e-04 4.423152e-04 2.793821e-04
## VSBPDIA -1.519181e-03 1.760826e-04 -5.638551e-04 -4.840591e-04
## VSPULSE 6.300131e-04 1.530818e-04 2.026490e-04 1.158097e-03
## VSRESP 5.287502e-04 -5.969245e-04 -1.446891e-03 -1.044660e-03
## VSTEMP 1.954060e-03 -3.778388e-04 -4.691222e-03 -2.317769e-03
## SymptomeSeverety 1.905838e-02 3.020027e-03 6.375911e-03 -1.240536e-03
## SymptomeChronicity -1.301418e-02 1.194354e-03 -1.076825e-02 1.657044e-04
## BC.USEA -5.747747e-02 7.334935e-01 -2.273525e-01 2.455721e-01
## BCVOMIT -6.760587e-02 3.453501e-01 -1.536750e-01 1.014751e-01
## BCDIARRH -3.187469e-02 -1.644539e-01 9.193459e-03 -5.347610e-02
## BCCONSTP 1.209402e-02 -1.485322e-02 -2.749907e-02 -4.076840e-02
## BCABDOMN 5.203586e-02 -6.437114e-02 -3.394184e-02 9.548765e-02
## BCSWEATN 6.302326e-02 2.317580e-02 1.023932e-01 6.690795e-02
## BCDIZZY 2.259900e-02 -1.452637e-01 3.459823e-03 -3.576869e-02
## BCENERGY -8.496617e-03 2.081074e-03 2.456484e-02 -6.224454e-02
## BCDROWSY -5.587858e-02 -4.009010e-02 1.773617e-02 3.201305e-02
## BCVISION 5.661976e-03 2.623666e-02 1.077921e-01 -6.528648e-02
## BCHDACHE -4.966207e-02 -9.477093e-02 -6.322667e-02 3.238735e-02
## BCDRYMTH 3.080843e-02 -3.707572e-02 2.722026e-02 3.832997e-02
## BCBREATH -1.850192e-02 3.437351e-02 -1.655734e-02 2.329894e-02
## BCCOUGH 9.276556e-03 2.600255e-02 3.112299e-02 -5.540288e-02
## BCPALPIT -1.614735e-01 3.209384e-01 3.511651e-01 -1.929805e-01
## BCCHEST -3.505950e-02 1.927304e-01 -6.727710e-02 8.711716e-02
## BCURNDIS -1.149579e-02 1.115029e-01 2.937147e-02 1.996396e-01
## BCURNFRQ 8.373642e-03 4.459823e-03 -6.145966e-02 -2.072224e-03
## BCANKLE 5.209434e-02 -4.634168e-02 -5.349372e-02 -5.964048e-02
## BCMUSCLE 2.643460e-02 -3.226758e-03 8.444155e-04 1.298745e-02
## BCRASH -1.120565e-01 -6.801683e-02 1.056376e-02 1.017690e-01
## BCINSOMN 1.663023e-03 1.155301e-02 8.352543e-02 2.054481e-02
## BCDPMOOD -9.529318e-03 -5.891474e-02 2.355100e-02 2.182257e-01
## BCCRYING 1.117872e-01 1.772933e-01 -3.324133e-01 -8.228378e-01
## BCELMOOD 1.641793e-02 -4.231918e-02 2.948916e-03 7.903860e-03
## BCWANDER -1.804042e-02 -1.749477e-02 -2.300799e-02 2.194321e-02
## BCFALL -9.474371e-03 -4.313456e-02 4.883738e-02 3.331476e-02
## BCOTHER -9.474371e-03 -4.313456e-02 4.883738e-02 3.331476e-02
## CTWHITE 6.710370e-03 9.225291e-04 7.240960e-03 -2.197467e-03
## CTRED -5.739182e-06 -1.413044e-06 3.664553e-05 -5.106734e-06
## PROTEIN -1.463438e-04 -1.838206e-04 -7.708123e-04 -1.755726e-04
## GLUCOSE 4.014495e-05 6.841504e-04 5.829307e-04 3.543019e-04
## ApoEGeneAllele1 -6.447953e-03 2.153790e-02 -2.165935e-02 4.326331e-02
## ApoEGeneAllele2 -6.313361e-03 1.310009e-02 2.412426e-02 -1.804687e-02
## CDMEMORY -2.775558e-17 1.387779e-17 -4.163336e-17 -1.110223e-16
## CDORIENT -2.509830e-01 -1.596687e-01 -6.556247e-01 1.214320e-01
## CDJUDGE 2.296798e-01 1.538784e-01 2.001512e-01 -7.341782e-02
## CDCOMMUN 3.742972e-02 4.402409e-02 1.104748e-01 1.165538e-02
## CDHOME -6.302192e-01 -3.377860e-02 2.563664e-01 -1.868388e-01
## CDCARE 6.132345e-01 -3.808686e-02 -2.190919e-02 5.825497e-02
## CDGLOBAL -3.223680e-02 2.048998e-02 6.522343e-02 7.326884e-02
## PC53 PC54 PC55 PC56
## MMSCORE -3.378048e-03 -6.101878e-03 -7.680000e-04 -1.642608e-03
## FAQTOTAL 5.553909e-03 -1.183634e-03 2.429451e-03 -1.007030e-04
## GDTOTAL -1.513490e-02 -6.905714e-03 3.544305e-03 -8.813694e-04
## adascog -2.707172e-05 -2.468447e-03 5.468579e-04 1.901048e-07
## sobcdr 1.645257e-02 8.347388e-03 -5.435752e-03 5.328086e-03
## DXCURREN -1.330573e-01 -7.558196e-04 9.270431e-03 -1.279207e-02
## DX_Conversion 9.345409e-03 7.209569e-03 2.002721e-02 6.422722e-02
## DXCONTYP 9.072894e-03 -3.350483e-03 -7.425392e-03 -8.728873e-03
## DX_Confidence 1.512825e-02 -6.384763e-03 -6.487773e-03 -1.013299e-02
## Gender -3.394029e-03 2.200660e-02 -2.901147e-03 -1.913141e-02
## Married -5.634665e-03 -4.495877e-02 2.111685e-02 -4.519772e-03
## Education -3.343312e-03 4.443848e-04 7.996703e-04 -1.522317e-03
## Age -8.449698e-04 6.610131e-04 -3.729155e-04 -6.688452e-04
## Weight_Kg -1.362660e-04 -2.947509e-05 -4.163802e-04 -3.537097e-05
## VSBPSYS 2.793923e-04 -2.427451e-04 4.184889e-04 -2.310231e-04
## VSBPDIA -6.035049e-04 1.348072e-04 -4.658360e-04 8.936778e-04
## VSPULSE 6.336974e-04 -3.539337e-04 -1.612134e-04 -3.449411e-04
## VSRESP -9.542331e-04 -2.526633e-03 -6.984691e-04 -2.209474e-03
## VSTEMP 4.768979e-03 3.773796e-04 1.072567e-03 2.415353e-03
## SymptomeSeverety 4.077558e-03 1.088543e-02 1.098439e-02 4.441268e-03
## SymptomeChronicity -2.155181e-05 -5.228392e-03 -7.098030e-03 -5.655641e-03
## BC.USEA -1.247845e-01 2.523768e-01 -2.390010e-01 1.109486e-01
## BCVOMIT -6.216410e-02 -1.264190e-01 -3.804022e-02 -2.418935e-01
## BCDIARRH 7.299066e-03 3.083854e-02 -1.881330e-02 5.140061e-02
## BCCONSTP 6.739686e-03 2.470332e-03 -1.356791e-02 2.189509e-03
## BCABDOMN -9.602469e-02 -2.722425e-02 -7.279757e-02 -4.160582e-02
## BCSWEATN 8.430721e-02 -9.241875e-02 1.247158e-02 7.979853e-02
## BCDIZZY 6.411678e-04 -4.203859e-02 8.216323e-03 2.409618e-02
## BCENERGY -1.550465e-02 -3.275055e-03 2.405585e-02 2.964392e-02
## BCDROWSY 1.576164e-02 4.380602e-03 -8.764446e-04 3.008265e-02
## BCVISION 5.803868e-02 7.464919e-02 1.517203e-03 -9.799000e-04
## BCHDACHE -5.138917e-02 6.896424e-02 -1.409168e-02 -2.017400e-02
## BCDRYMTH -3.029471e-03 1.953687e-02 3.921975e-03 2.115730e-02
## BCBREATH -1.691022e-01 4.318713e-02 -7.449435e-02 -4.006540e-02
## BCCOUGH 2.462406e-02 2.385301e-02 3.201773e-02 7.033023e-04
## BCPALPIT 7.896029e-01 -1.997856e-02 3.700047e-02 -4.584417e-02
## BCCHEST -1.140467e-01 -2.203138e-02 9.469363e-01 -9.406751e-02
## BCURNDIS -3.661837e-02 -9.212375e-01 -8.135921e-02 7.660531e-02
## BCURNFRQ -2.124341e-02 7.713619e-03 5.165248e-04 -1.407266e-02
## BCANKLE 3.783082e-02 -8.094924e-02 -1.635909e-03 9.448114e-03
## BCMUSCLE -1.427388e-02 -1.573240e-02 -1.043681e-03 1.213052e-02
## BCRASH 1.583534e-03 -9.808849e-03 1.913667e-03 5.724715e-02
## BCINSOMN -2.227944e-02 -3.784782e-02 -2.990800e-02 1.076688e-02
## BCDPMOOD 4.691401e-02 4.613403e-02 -5.994471e-02 -7.531667e-03
## BCCRYING -1.127315e-01 -1.530851e-01 -1.931939e-02 2.204977e-02
## BCELMOOD -1.510657e-03 -2.237427e-02 -1.106933e-01 -9.409058e-01
## BCWANDER 2.663838e-02 2.114531e-02 3.373983e-03 6.288963e-03
## BCFALL 1.488382e-02 -1.655092e-02 1.588104e-02 7.248085e-03
## BCOTHER 1.488382e-02 -1.655092e-02 1.588104e-02 7.248085e-03
## CTWHITE -1.630982e-03 1.235003e-02 2.916713e-05 -5.080012e-03
## CTRED -1.997695e-05 -1.200219e-05 2.251232e-06 -6.049085e-06
## PROTEIN 2.714235e-04 4.134966e-04 4.583441e-04 -3.040158e-05
## GLUCOSE 6.802890e-05 -6.871914e-04 -2.852655e-04 2.075812e-04
## ApoEGeneAllele1 1.283476e-02 2.284066e-03 7.417327e-03 7.439074e-03
## ApoEGeneAllele2 -1.697817e-02 -6.947420e-03 1.311606e-02 -1.141311e-02
## CDMEMORY 2.081668e-17 -1.734723e-18 6.505213e-19 -3.252607e-19
## CDORIENT 3.545456e-01 -4.787664e-02 1.252790e-02 1.826323e-03
## CDJUDGE -1.635942e-01 -3.389710e-02 -3.823811e-02 -1.305378e-02
## CDCOMMUN -5.218330e-02 1.482306e-02 -1.814282e-02 -1.313960e-02
## CDHOME -2.810643e-01 -5.983923e-03 -1.977759e-02 -7.188475e-03
## CDCARE 1.340314e-01 4.118195e-02 3.817364e-02 -6.262216e-04
## CDGLOBAL 2.471735e-02 4.010004e-02 2.002123e-02 3.750984e-02
## PC57 PC58 PC59 PC60
## MMSCORE 3.864262e-03 6.868399e-04 1.391818e-04 0.000000e+00
## FAQTOTAL 1.092379e-03 -1.970672e-03 -6.700330e-04 1.114145e-17
## GDTOTAL -3.950470e-03 -4.792259e-03 2.218913e-03 1.237474e-18
## adascog -8.343141e-04 8.693431e-04 -4.131219e-04 -2.256373e-18
## sobcdr 6.128386e-04 -7.888004e-03 -4.342023e-04 7.805293e-03
## DXCURREN 6.687184e-03 1.372053e-02 1.180474e-02 4.803016e-17
## DX_Conversion -9.784468e-01 8.991718e-02 1.620037e-02 -3.587873e-17
## DXCONTYP 1.448514e-01 -2.185916e-02 1.683167e-03 8.771262e-17
## DX_Confidence 1.613857e-03 -2.332062e-03 7.874156e-03 8.414955e-18
## Gender -1.973469e-03 -1.428644e-02 -1.787692e-03 2.264596e-17
## Married 1.227025e-03 1.836626e-03 1.004690e-02 -1.327129e-16
## Education 1.781863e-03 1.830294e-03 -4.339729e-04 4.507062e-18
## Age -7.478066e-04 -8.498868e-04 -6.004371e-04 5.149960e-19
## Weight_Kg -4.863643e-04 -3.963075e-05 2.076153e-05 -5.353248e-19
## VSBPSYS -3.090335e-05 2.198574e-04 -1.151802e-04 2.168404e-19
## VSBPDIA 2.271790e-04 -5.365120e-04 2.231442e-04 -7.589415e-19
## VSPULSE -1.180037e-04 -3.591738e-04 4.026697e-04 -2.032879e-20
## VSRESP 1.227951e-03 3.216935e-04 8.308921e-04 8.673617e-19
## VSTEMP -1.025078e-03 4.014640e-05 6.659725e-04 -1.290201e-17
## SymptomeSeverety 2.935171e-03 -2.133343e-02 -2.651289e-04 6.787106e-17
## SymptomeChronicity -2.408791e-03 1.572571e-02 -7.710003e-06 -5.429142e-17
## BC.USEA -3.655354e-02 -3.587713e-01 4.299682e-03 6.399503e-17
## BCVOMIT 5.982977e-02 8.492789e-01 -1.022927e-03 1.340345e-16
## BCDIARRH -1.015628e-02 -1.817049e-02 -1.418093e-02 -3.461315e-17
## BCCONSTP 1.298373e-02 1.194441e-02 9.221445e-03 -4.173331e-17
## BCABDOMN 1.104711e-02 6.125491e-02 9.539935e-03 -1.588695e-17
## BCSWEATN -1.770754e-03 4.694317e-02 3.046216e-03 8.809820e-17
## BCDIZZY 8.730372e-03 2.292096e-02 1.027249e-02 -9.795767e-17
## BCENERGY -1.273392e-02 6.618212e-04 -4.948846e-03 3.475037e-17
## BCDROWSY 4.245902e-02 -2.467353e-03 -1.933186e-02 1.820835e-16
## BCVISION -1.555350e-02 -8.192845e-04 -1.889499e-02 -1.829625e-16
## BCHDACHE -1.130152e-02 3.290480e-02 -1.946039e-02 2.317482e-18
## BCDRYMTH 5.553878e-02 -2.006663e-03 4.278355e-03 5.382386e-17
## BCBREATH -1.232715e-02 3.069616e-02 1.103077e-02 1.281561e-16
## BCCOUGH 1.288787e-02 -3.161750e-02 -8.291920e-03 -8.391047e-17
## BCPALPIT -6.197782e-03 9.885016e-03 -2.289855e-03 -1.968945e-16
## BCCHEST 1.320135e-03 -9.698265e-02 -3.751689e-05 -2.167049e-17
## BCURNDIS -2.521041e-02 -2.007933e-01 1.724587e-02 -1.438516e-17
## BCURNFRQ -5.253593e-03 2.420566e-03 -2.145314e-03 1.870520e-16
## BCANKLE -8.137718e-03 -1.505328e-02 5.162343e-03 -1.517133e-16
## BCMUSCLE -4.301640e-03 2.213220e-02 5.768241e-03 -1.461369e-16
## BCRASH -3.067449e-03 -1.737918e-02 9.792178e-05 -7.111096e-17
## BCINSOMN -5.336039e-03 2.528709e-02 7.474483e-03 1.396181e-16
## BCDPMOOD -6.153652e-03 2.181243e-02 -2.405004e-02 6.667843e-17
## BCCRYING -1.323172e-02 -5.206600e-02 2.198095e-02 -3.932943e-16
## BCELMOOD -8.790511e-02 -2.670471e-01 9.650490e-03 -1.426539e-16
## BCWANDER 1.866225e-02 5.867324e-03 9.965992e-01 1.046391e-16
## BCFALL 4.280091e-04 -5.384495e-03 2.067548e-04 7.065822e-01
## BCOTHER 4.280091e-04 -5.384495e-03 2.067548e-04 -7.065822e-01
## CTWHITE 1.270994e-03 4.181840e-03 -8.565836e-04 9.297034e-18
## CTRED -1.790519e-06 2.068861e-06 4.268231e-06 1.130048e-18
## PROTEIN -3.016825e-05 1.875567e-05 2.262789e-04 -2.480112e-18
## GLUCOSE -1.425256e-04 7.861899e-06 -2.145727e-04 -1.761829e-19
## ApoEGeneAllele1 4.267458e-03 -2.927458e-04 1.380161e-02 1.146002e-16
## ApoEGeneAllele2 -1.543013e-03 1.765504e-02 -7.923575e-03 -6.969048e-17
## CDMEMORY -4.878910e-19 2.168404e-18 -5.717472e-21 -3.250580e-02
## CDORIENT 2.916658e-02 -3.346918e-02 -4.144528e-02 -7.805293e-03
## CDJUDGE 5.824182e-04 3.001989e-02 -7.973970e-03 -7.805293e-03
## CDCOMMUN -9.546486e-03 1.588829e-02 5.826267e-03 -7.805293e-03
## CDHOME -6.495997e-04 -1.031374e-02 1.736273e-02 -7.805293e-03
## CDCARE -1.864392e-02 2.163256e-02 1.906554e-02 -7.805293e-03
## CDGLOBAL -2.961472e-04 -3.164583e-02 6.730508e-03 -7.805293e-03
## PC61 PC62
## MMSCORE 0.000000e+00 0.000000e+00
## FAQTOTAL -1.144778e-18 -7.521653e-16
## GDTOTAL 4.768978e-18 -8.423381e-15
## adascog 1.229946e-18 -1.922097e-15
## sobcdr -2.538514e-04 3.778838e-01
## DXCURREN 2.850266e-17 3.914404e-14
## DX_Conversion 1.773541e-17 -3.370727e-13
## DXCONTYP 3.700594e-17 5.734581e-14
## DX_Confidence -3.929951e-18 7.932955e-16
## Gender 2.430927e-17 -2.169053e-14
## Married 2.025532e-17 -7.539867e-15
## Education -8.407331e-19 -1.260873e-15
## Age 3.472835e-19 8.075138e-16
## Weight_Kg 1.270126e-18 -1.371949e-15
## VSBPSYS -5.692061e-19 -2.775558e-16
## VSBPDIA -1.609363e-19 3.573530e-16
## VSPULSE -4.390278e-19 7.795414e-17
## VSRESP -7.995991e-19 -1.942890e-15
## VSTEMP 1.622915e-18 -1.419004e-15
## SymptomeSeverety 6.223829e-17 -1.822154e-14
## SymptomeChronicity -5.231360e-17 2.012106e-14
## BC.USEA -9.348364e-17 2.547745e-13
## BCVOMIT -7.096527e-17 9.867107e-14
## BCDIARRH -1.053357e-16 3.526303e-14
## BCCONSTP -1.972253e-17 9.580010e-15
## BCABDOMN 6.741233e-17 -1.361005e-13
## BCSWEATN -4.760219e-17 8.876060e-14
## BCDIZZY -1.114911e-16 -6.445495e-14
## BCENERGY 2.740013e-17 2.451798e-14
## BCDROWSY 1.186424e-17 -4.631498e-14
## BCVISION 1.801671e-17 1.184992e-13
## BCHDACHE -2.233626e-18 -1.471894e-13
## BCDRYMTH 6.339555e-17 4.015845e-14
## BCBREATH -4.306803e-17 -1.313294e-14
## BCCOUGH -1.268100e-16 -1.658125e-15
## BCPALPIT -3.418710e-17 1.329225e-13
## BCCHEST -9.615889e-17 1.010691e-13
## BCURNDIS -6.921188e-17 -4.772489e-13
## BCURNFRQ -1.055742e-17 -9.388150e-14
## BCANKLE 4.623627e-17 -2.276627e-14
## BCMUSCLE 7.140954e-17 -1.067636e-14
## BCRASH -6.146640e-17 -1.092632e-14
## BCINSOMN 9.131693e-17 1.160929e-13
## BCDPMOOD 5.237840e-17 3.348754e-14
## BCCRYING 7.794707e-17 -7.023010e-14
## BCELMOOD 4.981485e-17 -1.003876e-13
## BCWANDER 1.302610e-17 1.310918e-13
## BCFALL -2.298016e-02 -1.461009e-02
## BCOTHER 2.298016e-02 1.461009e-02
## CTWHITE 3.978726e-18 4.445012e-15
## CTRED 4.081971e-20 -2.295120e-17
## PROTEIN -5.158431e-19 -5.247539e-17
## GLUCOSE 1.545835e-19 1.951564e-17
## ApoEGeneAllele1 -5.482167e-17 1.430618e-13
## ApoEGeneAllele2 3.127574e-17 -9.176904e-14
## CDMEMORY -9.994715e-01 -5.674615e-11
## CDORIENT 2.538514e-04 -3.778838e-01
## CDJUDGE 2.538514e-04 -3.778838e-01
## CDCOMMUN 2.538514e-04 -3.778838e-01
## CDHOME 2.538514e-04 -3.778838e-01
## CDCARE 2.538514e-04 -3.778838e-01
## CDGLOBAL 2.538514e-04 -3.778838e-01
# install.packages("factoextra")
library(factoextra)
## Loading required package: ggplot2
## Welcome! Related Books: `Practical Guide To Cluster Analysis in R` at https://goo.gl/13EFCZ
eigen<-get_eigenvalue(pcal)
eigen
## eigenvalue variance.percent cumulative.variance.percent
## Dim.1 2.273988e+05 9.890549e+01 98.90549
## Dim.2 1.484903e+03 6.458481e-01 99.55134
## Dim.3 3.337903e+02 1.451797e-01 99.69652
## Dim.4 2.200047e+02 9.568948e-02 99.79221
## Dim.5 1.264698e+02 5.500714e-02 99.84722
## Dim.6 1.073487e+02 4.669057e-02 99.89391
## Dim.7 7.522069e+01 3.271671e-02 99.92662
## Dim.8 7.058054e+01 3.069850e-02 99.95732
## Dim.9 3.931341e+01 1.709909e-02 99.97442
## Dim.10 1.480602e+01 6.439771e-03 99.98086
## Dim.11 1.230736e+01 5.353000e-03 99.98621
## Dim.12 9.649142e+00 4.196826e-03 99.99041
## Dim.13 8.238088e+00 3.583098e-03 99.99399
## Dim.14 3.151439e+00 1.370696e-03 99.99537
## Dim.15 2.455463e+00 1.067986e-03 99.99643
## Dim.16 1.944325e+00 8.456703e-04 99.99728
## Dim.17 1.730617e+00 7.527197e-04 99.99803
## Dim.18 8.819886e-01 3.836147e-04 99.99842
## Dim.19 3.431030e-01 1.492302e-04 99.99856
## Dim.20 2.956609e-01 1.285956e-04 99.99869
## Dim.21 2.640353e-01 1.148403e-04 99.99881
## Dim.22 2.479452e-01 1.078420e-04 99.99892
## Dim.23 1.826721e-01 7.945193e-05 99.99900
## Dim.24 1.712922e-01 7.450234e-05 99.99907
## Dim.25 1.623043e-01 7.059311e-05 99.99914
## Dim.26 1.383527e-01 6.017554e-05 99.99920
## Dim.27 1.361698e-01 5.922609e-05 99.99926
## Dim.28 1.223317e-01 5.320731e-05 99.99931
## Dim.29 1.048175e-01 4.558964e-05 99.99936
## Dim.30 1.007915e-01 4.383856e-05 99.99940
## Dim.31 9.107279e-02 3.961146e-05 99.99944
## Dim.32 8.979152e-02 3.905418e-05 99.99948
## Dim.33 8.551339e-02 3.719344e-05 99.99952
## Dim.34 8.402801e-02 3.654739e-05 99.99955
## Dim.35 8.083781e-02 3.515983e-05 99.99959
## Dim.36 7.769321e-02 3.379211e-05 99.99962
## Dim.37 7.549186e-02 3.283465e-05 99.99966
## Dim.38 6.890471e-02 2.996961e-05 99.99969
## Dim.39 6.376745e-02 2.773520e-05 99.99971
## Dim.40 6.069233e-02 2.639770e-05 99.99974
## Dim.41 5.863117e-02 2.550121e-05 99.99977
## Dim.42 5.580901e-02 2.427373e-05 99.99979
## Dim.43 5.242103e-02 2.280016e-05 99.99981
## Dim.44 4.903965e-02 2.132945e-05 99.99983
## Dim.45 4.703119e-02 2.045588e-05 99.99985
## Dim.46 4.509127e-02 1.961213e-05 99.99987
## Dim.47 4.400682e-02 1.914045e-05 99.99989
## Dim.48 4.140577e-02 1.800915e-05 99.99991
## Dim.49 3.382897e-02 1.471367e-05 99.99993
## Dim.50 2.910121e-02 1.265737e-05 99.99994
## Dim.51 2.704179e-02 1.176164e-05 99.99995
## Dim.52 2.515083e-02 1.093918e-05 99.99996
## Dim.53 2.305273e-02 1.002662e-05 99.99997
## Dim.54 2.010289e-02 8.743610e-06 99.99998
## Dim.55 1.402210e-02 6.098814e-06 99.99999
## Dim.56 1.028087e-02 4.471593e-06 99.99999
## Dim.57 8.480327e-03 3.688458e-06 99.99999
## Dim.58 8.322598e-03 3.619855e-06 100.00000
## Dim.59 3.567425e-03 1.551626e-06 100.00000
## Dim.60 1.391823e-27 6.053634e-31 100.00000
## Dim.61 1.391823e-27 6.053634e-31 100.00000
## Dim.62 1.391711e-27 6.053147e-31 100.00000
plot(pcal)
library(graphics)
biplot(pcal, choices = 1:2, scale = 1, pc.biplot = F)
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
## = arrow.len): zero-length arrow is of indeterminate angle and so skipped
## Warning in arrows(0, 0, y[, 1L] * 0.8, y[, 2L] * 0.8, col = col[2L], length
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qualit_vars <- as.factor(ad_data$SymptomeChronicity)
head(qualit_vars)
## [1] 2 2 3 2 3 3
## Levels: -4 0 1 2 3
# for plots of individuals
fviz_pca_ind(pcal, habillage = qualit_vars, addEllipses = TRUE, ellipse.level = 0.68) + theme_minimal()
# for Biplot of individuals and variables
fviz_pca_biplot(pcal, axes = c(1, 2), geom = c("point", "text"),
col.ind = "black", col.var = "steelblue", label = "all",
invisible = "none", repel = T, habillage = qualit_vars,
palette = NULL, addEllipses = TRUE, title = "PCA - Biplot")
library(scatterplot3d)
#Fit linear model
lm.fit <- lm(BCABDOMN ~ DXCURREN + CDGLOBAL, data = ad_data)
#plot results
myPlot <- scatterplot3d(ad_data$BCABDOMN, ad_data$DXCURREN, ad_data$CDGLOBAL)
# Get the ranges of the variable.names
summary(ad_data$DXCURREN)
## Min. 1st Qu. Median Mean 3rd Qu. Max.
## 1.000 1.000 2.000 1.958 2.000 3.000
summary(ad_data$BCABDOMN)
## Min. 1st Qu. Median Mean 3rd Qu. Max.
## 1.000 1.000 1.000 1.074 1.000 2.000
summary(ad_data$CDGLOBAL)
## Min. 1st Qu. Median Mean 3rd Qu. Max.
## 0.0000 0.0000 0.0000 0.0672 0.0000 2.0000
# Plot the linear model (line in 3D)
myCoef <- lm.fit$coefficients
plotX <- seq(0.93, 1.4,length.out = 100)
plotY <- seq(0,6,length.out = 100)
plotZ <- myCoef[1] + myCoef[2]*plotX + myCoef[3]*plotY # linear model
#Add the linear model to the 3D scatterplot
myPlot$points3d(plotX,plotY,plotZ, type = "l", lwd=2, col = "red")
myPlot <- scatterplot3d(ad_data$BCABDOMN, ad_data$DXCURREN, ad_data$CDGLOBAL)
# Static Plot
myPlot$plane3d(lm.fit, lty.box = "solid")
pca1 <- prcomp(as.matrix(cbind(ad_data$BCABDOMN, ad_data$DXCURREN, ad_data$CDGLOBAL)), center = T)
summary(pca1)
## Importance of components:
## PC1 PC2 PC3
## Standard deviation 0.7218 0.2619 0.24654
## Proportion of Variance 0.8011 0.1055 0.09345
## Cumulative Proportion 0.8011 0.9065 1.00000
normVec = c(pca1$rotation[,1][2]*pca1$rotation[,2][3]-
pca1$rotation[,1][3]*pca1$rotation[,2][2],
pca1$rotation[,1][3]*pca1$rotation[,2][1]-
pca1$rotation[,1][1]*pca1$rotation[,2][3],
pca1$rotation[,1][1]*pca1$rotation[,2][2]-
pca1$rotation[,1][2]*pca1$rotation[,2][1]
)
# install.packages("rgl")
# Interactive RGL 3D plot with PCA Plane
library(rgl)
## Warning in rgl.init(initValue, onlyNULL): RGL: unable to open X11 display
## Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
# Compute the 3D point representing the gravitational balance
dMean <- apply(cbind(ad_data$BCABDOMN, ad_data$DXCURREN, ad_data$CDGLOBAL), 2, mean)
# then the offset plane parameter is (d):
d <- as.numeric((-1)*normVec %*% dMean) # force the plane to go through the mean
# Plot the PCA Plane
plot3d(ad_data$BCABDOMN, ad_data$DXCURREN, ad_data$CDGLOBAL, type = "s", col = "red", size = 1)
planes3d(normVec[1], normVec[2], normVec[3], d, alpha = 0.5)
# Define the 3D features
x <- ad_data$BCABDOM
y <- ad_data$DXCURREN
z <- ad_data$CDGLOBAL
myDF <- data.frame(x, y, z)
### Fit a (bivariate-predictor) linear regression model
lm.fit <- lm(z ~ x+y)
coef.lm.fit <- coef(lm.fit)
### Reparameterize the 2D (x,y) grid, and define the corresponding model values z on the grid
x.seq <- seq(min(x),max(x),length.out=100)
y.seq <- seq(min(y),max(y),length.out=100)
z.seq <- function(x,y) coef.lm.fit[1]+coef.lm.fit[2]*x+coef.lm.fit[3]*y
# define the values of z = z(x.seq, y.seq), as a Matrix of dimension c(dim(x.seq), dim(y.seq))
z <- t(outer(x.seq, y.seq, z.seq))
# First draw the 2D plane embedded in 3D, and then add points with "add_trace"
# install.packages('plotly')
library(plotly)
##
## Attaching package: 'plotly'
## The following object is masked from 'package:ggplot2':
##
## last_plot
## The following object is masked from 'package:stats':
##
## filter
## The following object is masked from 'package:graphics':
##
## layout
myPlotly <- plot_ly(x=~x.seq, y=~y.seq, z=~z,
colors = c("blue", "red"),type="surface", opacity=0.7) %>%
add_trace(data=myDF, x=x, y=y, z=ad_data$CDGLOBAL, mode="markers",
type="scatter3d", marker = list(color="green", opacity=0.9,
symbol=105)) %>%
layout(scene = list(
aspectmode = "manual", aspectratio = list(x=1, y=1, z=1),
xaxis = list(title = "BCABDOM"),
yaxis = list(title = "DXCURREN"),
zaxis = list(title = "CDGLOBAL"))
)
# print(myPlotly)
myPlotly